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Name : BTH_I0008 (BTH_I0008) Accession : YP_440568.1 Strain : Genome accession: NC_007651 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 10582 - 12075 bp Length : 1494 bp Strand : + Note : identified by match to protein family HMM PF00437; match to protein family HMM TIGR02533 DNA sequence : GTGACGCAGGCGCTCGCGCAAGGCGCTCAGGATCAGCCTGCCGCGAGCGCGCCGTCGCCGCTCGCCGCGCGGCTGTTGCC GTACGGCTTCGCGAAGGCCGGCCAGATCCTGATCGCGCATCAGCACGCGGACACGCTCGAAGTGTGGATCAGCGAGCGCA CGAGCTCGGCCGCGCTTGCCGAAGTCGCGCGCAACTTCGGCGCGATCTCGTTGCTGCGCCTGCCGGCCGACGAACTCGCG CAGGCGATCAACCACGCGTACGCGCGCCAGGACGGCAGCGCCGCGCAGATCGTCGGCGAGGTCGAGGGCGAAGTCGACCT GTCGCGGCTGATGCAGGACATTCCCGAAGTCGAGGACTTGCTCGAATCGGAAGACGACGCGCCGATCATCCGGATGATCA ACGCGCTCTTGACGCAAGCGGCGCGCGAGCAGGCGTCGGACATCCACATCGAGCCGTTCGAGAACGCATCGGTCGTGCGC TTTCGCGTCGACGGCACGCTGCGCGACGTCGTGCGGCCGAAGAAGGCGCTGCACGGCGCGCTGATCTCGCGGATCAAGAT CATGGCGCAGCTCGACATCGCGGAGAAGCGCCTGCCGCAGGACGGCCGGATCACGCTGCGCGTGGGCGGGCGGCCCGTCG ACGTGCGGGTGTCGACGCTGCCGACCGGGCACGGCGAGCGCGCGGTGCTGCGTCTGCTGGAGAAGGACGCGCAGCGGCTG AACCTCGAAGCGCTCGGCATGGGCCGCGACACGCTCGTGCAGTTCGACAAGCTGATCTCGCGCCCGCACGGCATCGTGCT CGTCACGGGGCCGACCGGCTCGGGCAAGACGACGACGCTGTACGCGTCGATGTCGCGGCTCGAAACCGCGACGACCAACA TCATGACGGTCGAGGACCCGATCGAATACGACCTCTCCGGCATCGGCCAGACGCAGGTGAACGAGCGGATCGGGATGACG TTCGCGCGCGCGCTGCGCTCGATCCTGCGTCAGGACCCGGACATCATCATGATCGGCGAAATCCGCGATCTCGAGACCGC GCAGATCGCGGTGCAGGCGTCGCTGACGGGCCACCTGGTGCTCGCGACGCTGCACACGAACGATGCGGCGTCGGCCGTCA CGCGTCTGACGGACATGGGCGTCGAGCCGTACCTGCTCGCGTCGTCGCTGCTCGGCGTGCTCGCGCAGCGGCTCGTGCGC CAGCTCTGCCCGGTGTGCAAGGAGGAGCGGCACGAGGACGGCCGCGCGGTCTGGCATCCGGTCGGCTGCGACAAGTGCGG GCATTCGGGTTACACGGGGCGCCGCGGCGTTTATGAGCTGCTCGTCATCGACGATTCGATCCGCTCGCTGATCCACCGCA ACGCAGCCGACGCGGAGATTCTCGCGACGGGCCGCGCGAACGGGATGCGCACGCTGCGCGACGATGCCGAACGCTGGCTC GCGGCGGGCGCGACGTCGCTCGAGGAAGTGCTGCGCGTGACGGGAGGCGCGTAG Protein sequence : MTQALAQGAQDQPAASAPSPLAARLLPYGFAKAGQILIAHQHADTLEVWISERTSSAALAEVARNFGAISLLRLPADELA QAINHAYARQDGSAAQIVGEVEGEVDLSRLMQDIPEVEDLLESEDDAPIIRMINALLTQAAREQASDIHIEPFENASVVR FRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLEKDAQRL NLEALGMGRDTLVQFDKLISRPHGIVLVTGPTGSGKTTTLYASMSRLETATTNIMTVEDPIEYDLSGIGQTQVNERIGMT FARALRSILRQDPDIIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGVEPYLLASSLLGVLAQRLVR QLCPVCKEERHEDGRAVWHPVGCDKCGHSGYTGRRGVYELLVIDDSIRSLIHRNAADAEILATGRANGMRTLRDDAERWL AAGATSLEEVLRVTGGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-115 | 54 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-115 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BTH_I0008 | YP_440568.1 | general secretion pathway protein E | VFG0182 | Protein | 9e-126 | 56 |
| BTH_I0008 | YP_440568.1 | general secretion pathway protein E | VFG2048 | Protein | 1e-115 | 54 |
| BTH_I0008 | YP_440568.1 | general secretion pathway protein E | VFG1876 | Protein | 4e-118 | 52 |
| BTH_I0008 | YP_440568.1 | general secretion pathway protein E | VFG0233 | Protein | 1e-86 | 49 |
| BTH_I0008 | YP_440568.1 | general secretion pathway protein E | VFG2426 | Protein | 2e-76 | 47 |
