Gene Information

Name : kdsB (BTH_I0740)
Accession : YP_441296.1
Strain :
Genome accession: NC_007651
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 849989 - 850780 bp
Length : 792 bp
Strand : -
Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS

DNA sequence : 
ATGACCTCCCCGCTCCCTTTCGTCGCCGTCGTCCCCGCCCGCCTCGCATCGACCCGCCTGCCGAACAAGCCGCTCGCCGA
TCTCGGCGGCAAGCCGATGGTCGTGCGCGTCGCCGAGCGCGCGCGTGAGGCGGGCGCGCAGCAGGTGCTCGTCGCGTCCG
ACGCGCAGAGCGTGCTCGACGCGGTGCGCGAGCACGGCTTCGACGCGGTGCTCACGCGCGCCGACCATCCGTCCGGCACC
GACCGCCTCGCCGAGGTCGCCGCGAAGCTCGGCTTCAGCGACGACACGATCGTCGTCAACGTTCAGGGCGACGAGCCGCT
GATCGATCCGCAGCTCGTGTGCGACGTAGCGTCGCACCTCGCCGCGCATCCGTCGTGCGCGATCGCGACGGCCGCGCACC
CGATTCACGAAGCGCACGAGGTGTTCAATCCGAACTACGTGAAGGTCGTGCTCGACGCGAACGGCGTCGCGCTGTACTTC
TCGCGCGCGCCGATTCCGTGGTCGCGCGACGCGTACCTGCCGCACTGGCCGAACATCGCGGCGATGCCCGCGCCGACGTG
CCCCGTCTATCGGCACATCGGCCTCTACGCGTATCGCGCGCGGTTCCTGCGCACGTACCCGACGCTCGCGCAGGCGCCGA
TCGAGGCGGCCGAGCAGCTCGAGCAGTTGCGCGCGATGTGGCATGGCGAGCGGATCGCCGTGCTCGTCACCGAGCACGCG
CCCGAGGCCGGCATCGACACGCCGGCCGATCTCGAACGCGTGCAGGCCCTTTTTCGGTCTCGGGCCAAATAA

Protein sequence : 
MTSPLPFVAVVPARLASTRLPNKPLADLGGKPMVVRVAERAREAGAQQVLVASDAQSVLDAVREHGFDAVLTRADHPSGT
DRLAEVAAKLGFSDDTIVVNVQGDEPLIDPQLVCDVASHLAAHPSCAIATAAHPIHEAHEVFNPNYVKVVLDANGVALYF
SRAPIPWSRDAYLPHWPNIAAMPAPTCPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRAMWHGERIAVLVTEHA
PEAGIDTPADLERVQALFRSRAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 1e-30 43
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 2e-30 43
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 4e-30 43