Gene Information

Name : BTH_I0673 (BTH_I0673)
Accession : YP_441229.1
Strain :
Genome accession: NC_007651
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 772946 - 773671 bp
Length : 726 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
TTGCGCGCGCGGCGGCGCTACAATGTTCGCCATCTCGAACGCATGCGACGGACGTTTTTCAGGATGCGGATACTGCTGGT
AGAAGACGATCGGATGATCGCCGACGGAGTGCGCAAGGCGCTGAAGGCCGACGGCTGCGCGGTCGACTGGGTGCAGGACG
GCGACGCGGCGCTCACCGCGCTCGGCGGCGAGGCGTACGATCTGCTGCTGCTCGATCTCGGGCTGCCCAAGCGCGACGGC
ATCGACGTGCTGCGCACGCTGCGCGCGCGCGGGCTCGCGCTGCCGGTGCTGATCCTGACCGCGCGCGACGCCGTCGCCGA
TCGCGTGAAGGGCCTCGACGCCGGCGCCGACGACTACCTCGTCAAGCCGTTCGATCTCGACGAGCTCGCCGCGCGGATGC
GCGCGCTGATCCGCCGCCAGTCGGGGCGCAGCGAATCGGTGATCCGGCACGGCGCGCTCACGCTCGATCCGGCGTCGCAC
CAGGTGACGCTCGACGGCGCGCCCGTCGCGCTTTCTGCACGCGAGTTCGCGCTGCTGGAGGCGCTGCTCGCGCGCCCGGG
CGCGGTGCTGTCGAAGAGCCAGCTCGAGGAGAAGATGTACGGCTGGGGCGAGGAAATCGGCAGCAACACCGTCGAGGTCT
ATATCCACGCGCTGCGCAAGAAGCTCGGCTCGGACCTGATCCGCAACGTCCGCGGCCTCGGTTACATGGTCGTGAAGGAA
GCGTAG

Protein sequence : 
MRARRRYNVRHLERMRRTFFRMRILLVEDDRMIADGVRKALKADGCAVDWVQDGDAALTALGGEAYDLLLLDLGLPKRDG
IDVLRTLRARGLALPVLILTARDAVADRVKGLDAGADDYLVKPFDLDELAARMRALIRRQSGRSESVIRHGALTLDPASH
QVTLDGAPVALSAREFALLEALLARPGAVLSKSQLEEKMYGWGEEIGSNTVEVYIHALRKKLGSDLIRNVRGLGYMVVKE
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-35 51
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-21 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BTH_I0673 YP_441229.1 DNA-binding response regulator BAC0487 Protein 3e-30 48
BTH_I0673 YP_441229.1 DNA-binding response regulator BAC0083 Protein 7e-23 45
BTH_I0673 YP_441229.1 DNA-binding response regulator BAC0197 Protein 1e-26 45
BTH_I0673 YP_441229.1 DNA-binding response regulator BAC0638 Protein 3e-22 44
BTH_I0673 YP_441229.1 DNA-binding response regulator NC_002516.2.879194.p Protein 9e-25 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BTH_I0673 YP_441229.1 DNA-binding response regulator VFG0473 Protein 2e-32 48
BTH_I0673 YP_441229.1 DNA-binding response regulator VFG1390 Protein 2e-31 45
BTH_I0673 YP_441229.1 DNA-binding response regulator VFG0596 Protein 7e-22 42
BTH_I0673 YP_441229.1 DNA-binding response regulator VFG1389 Protein 2e-21 41