Gene Information

Name : BTH_I3290 (BTH_I3290)
Accession : YP_443782.1
Strain :
Genome accession: NC_007651
Putative virulence/resistance : Resistance
Product : cadmium-translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 3744829 - 3747321 bp
Length : 2493 bp
Strand : -
Note : identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525

DNA sequence :
ATGACCGAGGCCACCCGGGCCGAAAACCGGCCGCGAACGCCCGAATCCCATCGCGACGGCGCGCATTCGGATGATGCGCG
CGTTTCGGCGCGCGCCGACGGCTGCTGCTCGCACGATCACCCGAACGGCGACTTCGAAACGCAGGCAAATCATGCGGCGC
AATCACATGATCGCGATTCGAGCGGCCACGGGCATGCTCCCGGTTCGCACGCGAACGACGACCATCCGCACGACCACGAC
CACGACCACGACCACGACCACGACCACGACCACGCCGGCTCGGCGTGCTGCGCCCCCGCGCCGGTCGCGTTCGCGCCGCT
GCCCGGCGCGCGACAGGCCGCCGACGGCCGCGTGCGCTCGGCGTTCCGGATCATGCAGATGGACTGCCCGACCGAGGAGG
CGCTGATCCGCAAGAAGCTCGGCGGAATGTCCGAAGTCGCGGCGCTCGAATTCAATCTGATGCAGCGGATGCTGACGGTC
GATCACACGCCAGGCGCGGAAGCCGGCATCGCCGCCGCGATCCGCTCGCTCGGCATGACGCCCGAGCAGGCGGGCGCCGG
CGCGCCGGGCCGGCCCGCCGCATCCGCGCAGGCCGATGCGCCGCGCCCGTGGTGGCCGCTCGCGGTCGCGGGCGTTGCGG
CGGCCGCCTCCGAGGCGGCCACCTGGCTGCAACTTCCGGTGTGGCTCGCCGCCGCGCTTGCGCTCGCCGCGGTGGCGACC
TGCGGCCTCGGCACGTATCGCAAGGGCTGGATCGCGCTCACCAACGGCAACCTGAACATCAATGCGCTGATGAGCATCGC
GGTGACGGGGGCGATGGCGATCGGCCAGTGGCCCGAGGCCGCGATGGTGATGGTGCTCTTCACCGTCGCCGAGCTGATCG
AGGCGCGTTCGCTCGACCGCGCGCGCAACGCGATCCAGAGCCTGATGCGCCTTGCGCCCGATACCGCGACGGTCAAGCAG
CCCGACGGCACGTGGCAGCCGGTCGACGCGGCGCAGGTCGCGCTCGGCGCGGTCGTGCGCGTGAAGCCCGGCGAGCGGAT
CGGCCTCGACGGCGAAATCGTCGCCGGCCGCTCGACCGTCAACCAGGCGCCGATCACGGGCGAAAGCCTGCCCGTCGAGA
AGGCCGAGGGCGACGCGGTATACGCGGGCACGATCAACGAGGCCGGCTCGTTCGAATATCGGGTGACGGCGGTCGCGAGC
AACACGACGCTCGCGCGGATCATTCATGCGGTCGAGGAGGCGCAGGGCTCGAAGGCGCCGACGCAGCGCTTCGTCGACAG
CTTCGCGCGCATCTATACGCCGATCGTGTTCGCGATCGCGCTCGTCGTTGCGATCGCGCCGCCGCTCCTGCTCGACGGCG
CGTGGCGCGACTGGATCTACCGCGCGCTCGTGCTGCTCGTGATCGCGTGTCCGTGCGCGCTCGTGATCTCGACGCCCGTC
ACGATCGTGTCGGGGCTCGCGGCGGCCGCGCGGCGCGGGATTCTCGTGAAGGGCGGCGTGTACCTCGAGCAGGGGCGCAG
ACTCGCGTGGCTCGCGCTCGACAAGACGGGCACGATCACGCGCGGCAAGCCGGTGCAGACCGATTTCGAGATGCGTGCGG
CCGATGTCGACGCCACGCACGTGCGGCGGCTCGCCGCGAGCCTCGCCGCGCGCTCGGATCACCCGGTTTCGCAGGCGGTC
GCGGCGGCGGCCGCGGCCGAAGCCGGCACGGGCGACGCCGCCCGCGCGACGAGCACGCCGTTCCTCGATGTCGCCGATTT
CGAGGCGATCCCCGGCCGCGGCGTGCGCGGCAAGATCGGCGGCGCGCCGTACTGGCTCGGCAATCATCGCCTCGTCGAGG
AGCTCGAATGCTGCACGAGCGAGCTCGAAACGCGCCTCGACGAGCTCGAGCGGCAGGGCAAGACGGTCGTGATGCTGATC
GACGGCGCGCGCGTGCTCGGCCTGTTCGCGGTGGCCGATACGGTGAAGGACACGAGCCGCGCGGCGGTCGCCGAACTGCA
CGCGCTCGGCATCAAGACCGCGATGCTGACGGGCGACAACCCGCACACCGCGCAAGCGATCGCGCAGCAGGTCGGCATCG
ACGATGCGCGCGGCAACCAGTTGCCGCAGGACAAGCTCGCCGCCGTCGACGAACTCGCGGCCGGCGGCCGCGCAGTCGGC
ATGGTTGGCGACGGGATCAACGACGCGCCGGCGCTCGCGCGCGCCGGCATCGGCTTCGCGATGGGCGCGATGGGCACCGA
CACCGCGATCGAGACGGCCGACGTCGCGCTGATGGACGACGACCTGCGCAAGATCCCGGCGTTCGTGCGGCTTTCACGCT
CGACGCACCGCGTGCTCGTGCAGAACATCGCGTTCGCGCTCGTCGTGAAGGCCGTGTTCGTCGGCCTCACGGTTGCGGGG
ATGAGCACGATGTGGATGGCGGTGTTCGCCGACGCGGGCGCGAGCCTCATCGTCGTCGGCAACGGTCTGCGGCTGCTGCG
CCGCGGTCAATGA

Protein sequence :
MTEATRAENRPRTPESHRDGAHSDDARVSARADGCCSHDHPNGDFETQANHAAQSHDRDSSGHGHAPGSHANDDHPHDHD
HDHDHDHDHDHAGSACCAPAPVAFAPLPGARQAADGRVRSAFRIMQMDCPTEEALIRKKLGGMSEVAALEFNLMQRMLTV
DHTPGAEAGIAAAIRSLGMTPEQAGAGAPGRPAASAQADAPRPWWPLAVAGVAAAASEAATWLQLPVWLAAALALAAVAT
CGLGTYRKGWIALTNGNLNINALMSIAVTGAMAIGQWPEAAMVMVLFTVAELIEARSLDRARNAIQSLMRLAPDTATVKQ
PDGTWQPVDAAQVALGAVVRVKPGERIGLDGEIVAGRSTVNQAPITGESLPVEKAEGDAVYAGTINEAGSFEYRVTAVAS
NTTLARIIHAVEEAQGSKAPTQRFVDSFARIYTPIVFAIALVVAIAPPLLLDGAWRDWIYRALVLLVIACPCALVISTPV
TIVSGLAAAARRGILVKGGVYLEQGRRLAWLALDKTGTITRGKPVQTDFEMRAADVDATHVRRLAASLAARSDHPVSQAV
AAAAAAEAGTGDAARATSTPFLDVADFEAIPGRGVRGKIGGAPYWLGNHRLVEELECCTSELETRLDELERQGKTVVMLI
DGARVLGLFAVADTVKDTSRAAVAELHALGIKTAMLTGDNPHTAQAIAQQVGIDDARGNQLPQDKLAAVDELAAGGRAVG
MVGDGINDAPALARAGIGFAMGAMGTDTAIETADVALMDDDLRKIPAFVRLSRSTHRVLVQNIAFALVVKAVFVGLTVAG
MSTMWMAVFADAGASLIVVGNGLRLLRRGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 0.0 66
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 1e-112 46
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 1e-112 46
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 3e-113 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BTH_I3290 YP_443782.1 cadmium-translocating P-type ATPase BAC0298 Protein 0.0 68
BTH_I3290 YP_443782.1 cadmium-translocating P-type ATPase BAC0461 Protein 3e-81 41