|
Name : ribD-1 (BTH_I1542) Accession : YP_442086.1 Strain : Genome accession: NC_007651 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : - Position : 1741844 - 1742980 bp Length : 1137 bp Strand : - Note : identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326 DNA sequence : ATGTTCTCGGAAAACGACTTCACCCACATGCAGCGCGCGCTCGCGCTCGCCGCGCGCGGGATGTACACGACGACGCCGAA CCCGCGCGTCGGCTGCGTGATCGTCAAGGACGACGTCGTGATCGGCGAGGGCTTCACGCAGCCGGCGGGCCAGGATCACG CGGAAGTGCAGGCGCTGAAGGACGCGCGCGCGCGCGGCAACGATCTGCGCGACGCAACCGTCTACGTGACGCTCGAGCCG TGCAGCCACTTCGGCCGCACGCCGCCATGCGCGCACGCGCTGATCGACGCGCGCGTCGGCAAGGTCGTCGCGGCGATGGA GGACCCGAATCCGCAGGTGTCCGGGCGCGGCCTCGCGATGCTGCGCGATGCGGGCATCGACGTGCGCTGCGGCCTGCTCG CGCACGAGGCGCACGAGATGAACATCGGCTTCGTGTCGCGGATGACGCGCGGCCGCCCGTGGGTGCGGATGAAGACGGCC GCGTCGCTCGACGGCCGCACCGCGCTCGCGTCCGGCGAGAGCAAATGGATCACGGGCGACGCCGCGCGCGACGACGGCCA CAAGTGGCGCGCGCGCGCGTGCGCGATCCTCACGGGCATCGGCACCGTGCGCGAAGACGATCCGCAGCTCAACGTGCGCG GCGTCGACACGCCGCGCCAGCCGCGCCGCGTGCTGATCGACAGCCGCCTCGACATCCCGCTCACCGCGCGCCTGCTCGAA GGCGGCTCGCTCCTCATCTTCTGCGGCGCGCTCGACGCGCAAAGCGAAGCGCGCGCTCAAGCGCTGCGCGCGCGCGGCGC GGAAATCGTGCCGCTCGCGAACGTGCGCGGCAAGGTCGATCTGCCCGCGATGCTCGCCGCGCTCGGCGAGCGCGGCATCA ACGAACTGCACGTCGAGGCGGGCCACAAGCTGAACGGCTCGCTGCTGCGCGAGCGCTGCGTCGACGAGCTGCTCGTCTAT CTCGCGCCGAGCCTGCTCGGCGCGGACGCGGCCGCGATGTTCGATCTCGCCGCGCCGGCGTCGCTCATCGACCGCACGCG GCTCGCGTTCCACAGCGTCGAGCGCGTCGGCGACGACCTGCGCATCCTCGCGCGCTTCGCGAGCGCTCACGCGAGCGCCT CCCCCACTCATTCATAA Protein sequence : MFSENDFTHMQRALALAARGMYTTTPNPRVGCVIVKDDVVIGEGFTQPAGQDHAEVQALKDARARGNDLRDATVYVTLEP CSHFGRTPPCAHALIDARVGKVVAAMEDPNPQVSGRGLAMLRDAGIDVRCGLLAHEAHEMNIGFVSRMTRGRPWVRMKTA ASLDGRTALASGESKWITGDAARDDGHKWRARACAILTGIGTVREDDPQLNVRGVDTPRQPRRVLIDSRLDIPLTARLLE GGSLLIFCGALDAQSEARAQALRARGAEIVPLANVRGKVDLPAMLAALGERGINELHVEAGHKLNGSLLRERCVDELLVY LAPSLLGADAAAMFDLAAPASLIDRTRLAFHSVERVGDDLRILARFASAHASASPTHS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 4e-57 | 48 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 4e-57 | 48 |
