Name : ureC (BTH_I1496) Accession : YP_442042.1 Strain : Genome accession: NC_007651 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0804 EC number : 3.5.1.5 Position : 1695019 - 1696713 bp Length : 1695 bp Strand : - Note : ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alp DNA sequence : TTGAGCCGCCGCGCGTATGCGGAAATGTACGGGCCGACGACGGGCGACCGCATTCGCCTCGCCGACACCGAGCTGCTGAT CGAAGTCGAGCGCGACTACACGATCTACGGCGAGGAAGTGAAGTTCGGCGGCGGCAAGGTGATCCGCGACGGAATGGGCC AGTCGCAGCTGAGCGCGGCCGACGTGGCGGACACGGTGATCACGAACGCGGTGATCCTCGACCACTGGGGCATCGTGAAA GCGGACATCGCGATCAAGCACGGGCGCATCGCGGCGATCGGCAAGGCCGGCAATCCGGACATCCAGCCGGGCGTGACGAT CGCGATCGGCGCGGCAACCGAGATCATCGCGGGCGAAGGCCTGATCGTGACGGCGGGCGGCATCGATACGCACATCCACT TCATCAGCCCGCAGCAGATCGACGAGGCGCTCGCGTCGGGCGTGACGACGATGATCGGCGGCGGCACGGGCCCCGCCACC GGCACCAACGCGACGACCTGCACGCCGGGGCCCTGGCACATGGAGCGGATGCTTCAGGCGGCCGACGGCTGGCCGATCAA CCTCGGCTTTCTCGGCAAGGGCAACGCAAGCCGGCCGCAGCCGCTCGTCGAGCAGATCGAGGCGGGCGCGATCGGCCTCA AGCTGCATGAGGACTGGGGCACGACGCCCGCCGCGATCGACAACTGCCTGACGGTGGCGGACGACACCGACACGCAGGTC GCGATCCACACCGACACGCTGAACGAAGGCGGCTTCGTCGAGGCGACGGTCGCCGCGTTCAAGGGCCGCACGATCCACAC GTACCACACCGAAGGCGCGGGCGGCGGCCACGCGCCCGACATCCTGAAGGTATGCGGCGAGCCGAACGTGCTGCCGTCGT CGACGAATCCCACGCGCCCGTACACGATCAACACGCTCGACGAGCATCTCGACATGCTGATGGTCTGCCATCACCTCGAC CCGTCGATCGCCGAGGATCTCGCGTTCGCCGAATCGCGGATTCGCCGCGAGACGATCGCGGCCGAGGACATCCTGCACGA TCTTGGCGCGCTGTCGATGCTGTCGTCCGATTCGCAGGCGATGGGCCGCGTCGGCGAAGTGATCATCCGCACGTGGCAGA GCGCGCACAAGATGAAGATGCAGCGCGGCGCGCTCGCCGAGGACAGCGCGCGCAACGACAACTTCCGCGCGAAGCGCTAC GTCGCGAAGTACACGATCAATCCGGCACTCACGCACGGCATCGCGCACGAAGTCGGCTCGATCGAGCCGGGCAAATGGGC GGACCTCGTGCTGTGGGAGCCCGCGTTCTTCGGGGTCAAGCCCGCGATGATCATCAAGGGCGGGATGATCGCGGTCGCGC AGATGGGAGATCCGAACGCGTCGATCCCGACGCCGCAGCCCGTTCATTACCGCGAGATGTTCGCCACCCGCGGCGGCGCG CTCGCGCGCACGTCGCTCACGTTCGTGTCGCAGCTCACGCTCGACGCGGGCATCGGCGCGCGCTATGGGCTCGCGAAGCG GCTCGTGCCGGTGCGCGGCTGCCGCACGGTGACCAAGCGCGACATGATCCACAACGCGTGGCAGCCGGCCATCAGCGTCG ACCCCGAAACCTACGACGTCGTCGCCGACGGCGCGCTGCTCACCTGCGAGCCCGCCGCCGTGCTGCCGATGGCGCAACGC TACTTCCTGTTCTGA Protein sequence : MSRRAYAEMYGPTTGDRIRLADTELLIEVERDYTIYGEEVKFGGGKVIRDGMGQSQLSAADVADTVITNAVILDHWGIVK ADIAIKHGRIAAIGKAGNPDIQPGVTIAIGAATEIIAGEGLIVTAGGIDTHIHFISPQQIDEALASGVTTMIGGGTGPAT GTNATTCTPGPWHMERMLQAADGWPINLGFLGKGNASRPQPLVEQIEAGAIGLKLHEDWGTTPAAIDNCLTVADDTDTQV AIHTDTLNEGGFVEATVAAFKGRTIHTYHTEGAGGGHAPDILKVCGEPNVLPSSTNPTRPYTINTLDEHLDMLMVCHHLD PSIAEDLAFAESRIRRETIAAEDILHDLGALSMLSSDSQAMGRVGEVIIRTWQSAHKMKMQRGALAEDSARNDNFRAKRY VAKYTINPALTHGIAHEVGSIEPGKWADLVLWEPAFFGVKPAMIIKGGMIAVAQMGDPNASIPTPQPVHYREMFATRGGA LARTSLTFVSQLTLDAGIGARYGLAKRLVPVRGCRTVTKRDMIHNAWQPAISVDPETYDVVADGALLTCEPAAVLPMAQR YFLF |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 5e-177 | 72 |
ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 5e-177 | 72 |
ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-162 | 63 |
ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-162 | 63 |
ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 2e-162 | 63 |
ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-162 | 63 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
ureC | YP_442042.1 | urease subunit alpha | VFG0270 | Protein | 2e-153 | 65 |