Gene Information

Name : BTH_I1450 (BTH_I1450)
Accession : YP_441996.1
Strain :
Genome accession: NC_007651
Putative virulence/resistance : Unknown
Product : TnpC protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 1642905 - 1644476 bp
Length : 1572 bp
Strand : -
Note : identified by match to protein family HMM PF03050

DNA sequence :
ATGACCGCGGCCAACGCCTATCCGGACGACATCGAAGCGCTCAAAGCCATGCTGCTCGAGCGCGATGCTCGCATTGGGCA
TCTCGAGGACGTAGTCGAATCGCACAAGGCGGCGAACGCCACCGCCAAGGCAGAGATCGAGCATCTGAAGCTGCTGATTG
CGAAGCTGCGCCGCATGCAGTTCGGTCGCAAGTCGGAGAAGCTCGATCGTCAGATCGAACAACTCGAACTGCGTCTGGAA
GAACTCGAAGCGGACGAAGGCGCGGCTCCGATCGAAATCCCGAAGACACCTCGTACCGCGCCGGAACAGTCGCCTCGCAA
GCCGCTGCCCGAGCATCTGCCACGTGAAGAGCAAACGCACTTGCCGCAATCGACCGAGACGTGCTCGGAATGCGGCGGCA
AGCTCAAGCTGCTAGGCGAAGACGTCTCCGAACAACTTGAATATGTACCTGCGAGCTTCCGCGTAATCCGTCATGTGCGG
CCCAAGTTCGCCTGCGCGTGCTGCGATCACATCGCGCAAGCAGCAGCGCCGAGTCGTCCCATCGAGCGCGGCCTGGCGGG
CCCTGGACTACTCGCGCACGTGCTGGTCTCGAAGTTCGCAGACCACATCCCGCTGTATCGGCAGTCGGTCATGTATGCGC
GTGAAGGCGTCGAACTCGACCGCTCGTTGCTCGCGAAGTGGGTCGGCCACGGCGCGACGCTTTTACAACCACTGGTCGAT
GCATTACGCCGTCATGTGATGACCGGGACGAAGCTGCATGCCGACGACACGCCGGTCCCAGTGCTCGAACCGGGCAACGG
CAAGACGAAGACTGGCCGCTTGTGGGTCTATGTGCGTGACGATCGATCGTCAGCCGATATGACGCCGCCAGCGGTGTGGT
TCGCTTACACGCCGGATCGCAAAGGCATCCATCCGCAACAACATCTCGAGACGTTCAGCGGCACGCTGCAAGCGGACGCC
TATGGCGGCTACCAGGCTATCTACGAGACCGGACGCGTGAGGGAAGCTGCCTGCTGGGCGCATGCCCGACGCCAGTTCTA
TGAGCTACACGCTGCGCGCCCGAACGCATTGAATACCGAAGCGCTCGAGCGTATCGGTGCGTTGTACAAGATCGAAGACG
CGATACGCGGCAAACCGCCCGACGAGCGTCGTGCGTATCGAGAAGCACATGCCCGACCGCTTCTCAGTCAGCTTCACGCC
TGGCTCACCGCCACGCTGGAGACACTCTCAAAGAAATCCGATACGAGTCGGGCGATTCTCTATGCGCTGAACCGATGGGA
AGCGCTCACACGCTATTGCGACGACGGCCAACTCGAGATCGATAACCTGCCGGTCGAGCGAGCGTTGCGTGGAGTGGCCA
TCGGGAGGCGGAATTACCTGTTCGCCGGTGCCGACTCCGGCGGCGAGCGCGCTGCCGCGATCTATAGCCTCATCGGAACG
GCGAAGCTCAACGGCATCGATCCCGAGGCGTATCTGCGCTTCGTCCTTGCCCGCATTGCTGATCACGCAATCAATCGTGT
CGATCAGCTCATGCCGTGGGCCATAGCTGATCAACTCCGCGACGACAGCTGA

Protein sequence :
MTAANAYPDDIEALKAMLLERDARIGHLEDVVESHKAANATAKAEIEHLKLLIAKLRRMQFGRKSEKLDRQIEQLELRLE
ELEADEGAAPIEIPKTPRTAPEQSPRKPLPEHLPREEQTHLPQSTETCSECGGKLKLLGEDVSEQLEYVPASFRVIRHVR
PKFACACCDHIAQAAAPSRPIERGLAGPGLLAHVLVSKFADHIPLYRQSVMYAREGVELDRSLLAKWVGHGATLLQPLVD
ALRRHVMTGTKLHADDTPVPVLEPGNGKTKTGRLWVYVRDDRSSADMTPPAVWFAYTPDRKGIHPQQHLETFSGTLQADA
YGGYQAIYETGRVREAACWAHARRQFYELHAARPNALNTEALERIGALYKIEDAIRGKPPDERRAYREAHARPLLSQLHA
WLTATLETLSKKSDTSRAILYALNRWEALTRYCDDGQLEIDNLPVERALRGVAIGRRNYLFAGADSGGERAAAIYSLIGT
AKLNGIDPEAYLRFVLARIADHAINRVDQLMPWAIADQLRDDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 5e-153 67
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-110 61
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 2e-122 59
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 1e-99 56
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 2e-128 55
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 2e-128 55
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 7e-129 55
unnamed AAC31494.1 L0015 Not tested LEE Protein 1e-128 55
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 5e-129 55
tnp AEA34686.1 transposase Not tested Not named Protein 1e-129 55
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 6e-128 55
unnamed AAL57570.1 unknown Not tested LEE Protein 2e-128 55
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 9e-128 54
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 1e-128 54
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 9e-128 54
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 9e-113 54
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 2e-123 52
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 3e-115 52
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 3e-115 52
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 2e-109 51
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 3e-109 49
unnamed AAL08460.1 unknown Not tested SRL Protein 3e-103 48
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 4e-82 43
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 3e-87 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BTH_I1450 YP_441996.1 TnpC protein VFG1700 Protein 5e-111 61
BTH_I1450 YP_441996.1 TnpC protein VFG1513 Protein 6e-100 56
BTH_I1450 YP_441996.1 TnpC protein VFG0793 Protein 7e-129 55
BTH_I1450 YP_441996.1 TnpC protein VFG1736 Protein 6e-91 50
BTH_I1450 YP_441996.1 TnpC protein VFG1051 Protein 2e-103 48