Gene Information

Name : BTH_I1447 (BTH_I1447)
Accession : YP_441993.1
Strain :
Genome accession: NC_007651
Putative virulence/resistance : Unknown
Product : TnpC protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 1638173 - 1639744 bp
Length : 1572 bp
Strand : +
Note : identified by match to protein family HMM PF03050

DNA sequence :
ATGACCGCGGCCAACGCCTATCCGGACGACATCGAAGCGCTCAAAGCCATGCTGCTCGAGCGCGATGCTCGCATTGGGCA
TCTCGAGGACGTAGTCGAATCGCACAAGGCGGCGAACGCCACCGCCAAGGCAGAGATCGAGCATCTGAAGTTGCTGATTG
CGAAGCTGCGCCGCATGCAGTTCGGTCGCAAGTCGGAGAAGCTCGATCGTCAGATCGAACAACTCGAACTGCGTCTGGAA
GAACTCGAAGCGGACGAAGGCGCGGCTCCGATCGAAATCCCGAAGACACCTCGTACCGCGCCGGAACAGTCGCCTCGCAA
GCCGCTGCCCGAGCATCTGCCACGTGAAGAGCAAACGCACTTGCCGCAATCGACCGAGACGTGCTCGGAATGCGGCGGCA
AGCTCAAGCTGCTAGGCGAAGACGTCTCCGAACAACTTGAATATGTACCTGCGAGCTTCCGCGTAATCCGTCATGCGCGG
CCCAAGTTCGCCTGCGCGTGCTGCGATCACATCGCGCAAGCAGCAGCGCCGAGTCGTCCCATCGAGCGCGGCCTGGCGGG
CCCTGGACTACTCGCGCACGTGCTGGTCTCGAAGTTCGCAGACCACATCCCGCTGTATCGGCAGTCGGTCATGTATGCGC
GTGAAGGCGTCGAACTCGACCGCTCGTTGCTCGCGAAGTGGGTCGGCCACGGCGCGACGCTTTTACAACCACTGGTCGAT
GCATTACGCCGTCATGTGATGACCGGGACGAAGCTGCATGCCGACGACACGCCGGTCCCAGTGCTCGAACCGGGCAACGG
CAAGACGAAGACTGGCCGCTTGTGGGTCTATGTGCGTGACGATCGATCGTCAGCCGATATGACGCCGCCAGCGGTGTGGT
TCGCTTACACGCCGGATCGCAAAGGCATCCATCCGCAACAACATCTCGAGACGTTCAGCGGCACGCTGCAAGCGGACGCC
TATGGCGGCTACCAGGCTATCTACGAGACCGGACGCGTGAGGGAAACTGCCTGCTGGGCGCATGCCCGACGCCAGTTCTA
TGAGCTACACGCTGCGCGCCCGAACGCATTGAATACCGAAGCGCTCGAGCGTATCGGTGCGTTGTACAAGATCGAAGACG
CGATACGCGGCAAACCGCCCGACGAGCGTCGTGCGTATCGAGAAGCACATGCCCGACCGCTTCTCAGTCAGCTTCACGCC
TGGCTCACCGCCACGCTGGAGACACTCTCAAAGAAATCCGATACGAGTCGGGCGATTCTCTATGCGCTGAACCGATGGGA
AGCGCTCACACGCTATTGCGACGACGGCCAACTCGAGATCGATAACCTGCCGGTCGAGCGAGCGTTGCGTGGAGTGGCCA
TCGGGAGGCGGAATTACCTGTTCGCCGGTGCCGACTCCGGCGGCGAGCGCGCTGCCGCGATCTATAGCCTCATCGGAACG
GCGAAGCTCAACGGCATCGATCCCGAGGCGTATCTGCGCTTCGTCCTTGCCCGCATTGCTGATCACGCAACCAATCGTGT
CGATCAGCTCATGCCGTGGGCCATAGCTGATCAACTCCGCGACGACAGCTGA

Protein sequence :
MTAANAYPDDIEALKAMLLERDARIGHLEDVVESHKAANATAKAEIEHLKLLIAKLRRMQFGRKSEKLDRQIEQLELRLE
ELEADEGAAPIEIPKTPRTAPEQSPRKPLPEHLPREEQTHLPQSTETCSECGGKLKLLGEDVSEQLEYVPASFRVIRHAR
PKFACACCDHIAQAAAPSRPIERGLAGPGLLAHVLVSKFADHIPLYRQSVMYAREGVELDRSLLAKWVGHGATLLQPLVD
ALRRHVMTGTKLHADDTPVPVLEPGNGKTKTGRLWVYVRDDRSSADMTPPAVWFAYTPDRKGIHPQQHLETFSGTLQADA
YGGYQAIYETGRVRETACWAHARRQFYELHAARPNALNTEALERIGALYKIEDAIRGKPPDERRAYREAHARPLLSQLHA
WLTATLETLSKKSDTSRAILYALNRWEALTRYCDDGQLEIDNLPVERALRGVAIGRRNYLFAGADSGGERAAAIYSLIGT
AKLNGIDPEAYLRFVLARIADHATNRVDQLMPWAIADQLRDDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 3e-153 66
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-109 61
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 9e-122 59
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 7e-100 56
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 4e-127 55
unnamed AAL57570.1 unknown Not tested LEE Protein 8e-128 55
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 3e-128 54
tnp AEA34686.1 transposase Not tested Not named Protein 1e-128 54
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 5e-127 54
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 5e-127 54
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 1e-127 54
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 1e-127 54
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 9e-128 54
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 4e-128 54
unnamed AAC31494.1 L0015 Not tested LEE Protein 8e-128 54
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 2e-113 54
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 8e-124 52
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 3e-115 51
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 3e-115 51
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 7e-109 50
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 9e-109 49
unnamed AAL08460.1 unknown Not tested SRL Protein 2e-102 48
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 3e-87 42
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 2e-81 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BTH_I1447 YP_441993.1 TnpC protein VFG1700 Protein 4e-110 61
BTH_I1447 YP_441993.1 TnpC protein VFG1513 Protein 4e-100 56
BTH_I1447 YP_441993.1 TnpC protein VFG0793 Protein 5e-128 54
BTH_I1447 YP_441993.1 TnpC protein VFG1736 Protein 4e-91 50
BTH_I1447 YP_441993.1 TnpC protein VFG1051 Protein 1e-102 48