Gene Information

Name : BTH_I1102 (BTH_I1102)
Accession : YP_441650.1
Strain :
Genome accession: NC_007651
Putative virulence/resistance : Unknown
Product : TnpB protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 1243397 - 1243783 bp
Length : 387 bp
Strand : +
Note : identified by match to protein family HMM PF05717

DNA sequence :
ATGATCGGGCTGCCCAGCCGCACAAAGGTCTGGCTGGCCGCGGGTGTGACTGATATGCGTTCAGGCTTCAACAGCTTGGC
CGCGAAGGTCCAGACCGTATTGGAACGCGATCCCTTCAGCGGTCACGTGTTCGTGTTCCGAGGCAAGCGCGGCGATCTGG
TCAAAGTGCTGTGGTGGAGCGGCGACGGCATGTGTCTTCTGATGAAACGCCTGGAACGGGGCCGATTCGTTTGGCCACGC
GCCGACGGTGGCGTTGTCTGCCTGAGCCAAGCCCAACTGTCGATGCTGCTCGAAGGTACCAGGCTATCTACGAGACCGGG
GGTATCCGGAATTTCGTGTGTGAGGCGGGTTGAGATTCAGACTCCAATGTTGAATCGTTCCGGGTAA

Protein sequence :
MIGLPSRTKVWLAAGVTDMRSGFNSLAAKVQTVLERDPFSGHVFVFRGKRGDLVKVLWWSGDGMCLLMKRLERGRFVWPR
ADGGVVCLSQAQLSMLLEGTRLSTRPGVSGISCVRRVEIQTPMLNRSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 1e-33 79
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 5e-30 71
unnamed AAL99258.1 unknown Not tested LEE Protein 5e-30 71
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 8e-30 71
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 5e-30 71
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 8e-30 71
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 8e-30 71
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 8e-30 71
unnamed AAC31493.1 L0014 Not tested LEE Protein 5e-30 71
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 2e-29 70
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 3e-29 70
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 3e-29 70
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-29 70
unnamed AAL08461.1 unknown Not tested SRL Protein 1e-29 69
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 2e-30 62
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 2e-30 62
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 2e-30 62
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 4e-28 59
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 4e-28 59
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 8e-28 58
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 8e-28 58
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 3e-26 58
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 3e-26 58
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 1e-27 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BTH_I1102 YP_441650.1 TnpB protein VFG0792 Protein 2e-30 71
BTH_I1102 YP_441650.1 TnpB protein VFG1709 Protein 2e-30 71
BTH_I1102 YP_441650.1 TnpB protein VFG1698 Protein 5e-30 70
BTH_I1102 YP_441650.1 TnpB protein VFG1052 Protein 5e-30 69
BTH_I1102 YP_441650.1 TnpB protein VFG1665 Protein 7e-31 62
BTH_I1102 YP_441650.1 TnpB protein VFG1737 Protein 3e-28 56