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Name : BTH_II0832 (BTH_II0832) Accession : YP_439029.1 Strain : Genome accession: NC_007650 Putative virulence/resistance : Virulence Product : ATP synthase SpaL Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : 3.6.3.14 Position : 973766 - 975076 bp Length : 1311 bp Strand : + Note : Invasion protein InvC; necessary for efficient entry of S.typhimurium into cultured epithelial cells. Probable catalytic subunit of a protein translocase DNA sequence : ATGAAGGCCGCGGGCGATCCGCTGCGGCTCCTCGCGCGGCGCGCGCATCCGCGCCGCATCCAGGGGCCGATCATCGAGGC GCCGCTGCCGGACGTCGCGATCGGCGAGCTGTGCGCGATTCGCGCAGCGGCGGGCAGCGATACGACGATCGGACGCGCGC AGGTGGTCGGCTTCGGGCGCGACACCGCGATCCTGAGCGCGCTCGGCAGCACGGCCGGGTTGTCGCGGCAGGTCGCGCTC GTGCCGACGGGCGAGCGGATGACGATCGATGTGTCGCCGGCGCTGCTCGGCGCGGTCGTCGACGCGGCGGGCGGCGTCGT CGAGACGCTTGGCACGGCGGGGGCGTTGCGCGGCGCCGCGCCGCGCCGCAGCGCGATCGACGCCGCGCCGCCCGATTACG CGGCGCGGCGGCCGATCGAGCGCCGGCTCGCGACGGGCGTGCGCGCGATCGATGGGCTGCTCACGTGCGGCGTCGGCCAG CGCTTCGGCATCTTCGCGGCGGCGGGCTGCGGCAAGACTTCGCTGATGAACATGATGATCGAGCACGCGGCGGCCGACGT GTACGTGGTCGCGCTGATCGGCGAGCGCGGCCGCGAGGTGTCCGAGTTCGTCGAGCGGATGCGGCGCTCGGGCAGCCGGG ACCGCACGGTCGTCGTGTACGCGACGTCGGACCGCGCGTCGGTGGACCGCTGCAACGCGGCGCTCGTCGCGACGACGATC GCCGAGTATTTCCGCGATCTGGGCTGCGACGTGATGCTGTTTCTCGATTCGATGACCCGCTACGCGCGCGCGCTGCGCGA CCTCGCGCTCGCGACGGGCGAAGCGCCCGCGCGGCGCGGCTATCCGGCCTCGGTGTTCGAGCAGTTGCCGCGGCTGCTCG AGCGGCCCGGGCGCACGCATGCGGGGAGCATCACCGCGTTCTACACGGTGCTGCTCGAAAACGAAGAGGAGCCCGATCCG ATCGGCGACGAGATCCGCTCGATCGTTGACGGTCATGTGTATTTGAGCCGGCAGCTCGGCGCGAAGGGGCATTTCCCTGC GATCGACGTGTTGAAAAGCGCGAGCCGCCTGTTCGACGAGATCGCCGACGCGCCGCATCGTTCGCTCGCGAAGCGGTTCC GGCAGCACCTCGCGCGCATCGACGAGATGCAGGTGTTTCTCGATCTCGGCGAATACCGGCGCGGCGAGAACCCGGAGAAC GACGACGCGCTCGACAGGCGGCCGGCGCTCGACGCGTTCCTGAAGCAGGAAATCGACGAGGCGTCGGCGTTCGGCGACAC CCTCGAACGGATGCGCGAGGCCGCGTCGTGA Protein sequence : MKAAGDPLRLLARRAHPRRIQGPIIEAPLPDVAIGELCAIRAAAGSDTTIGRAQVVGFGRDTAILSALGSTAGLSRQVAL VPTGERMTIDVSPALLGAVVDAAGGVVETLGTAGALRGAAPRRSAIDAAPPDYAARRPIERRLATGVRAIDGLLTCGVGQ RFGIFAAAGCGKTSLMNMMIEHAAADVYVVALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRASVDRCNAALVATTI AEYFRDLGCDVMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLERPGRTHAGSITAFYTVLLENEEEPDP IGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLKSASRLFDEIADAPHRSLAKRFRQHLARIDEMQVFLDLGEYRRGENPEN DDALDRRPALDAFLKQEIDEASAFGDTLERMREAAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ysaN | AAS66842.1 | YsaN | Not tested | SSR-1 | Protein | 3e-96 | 59 |
| invC | YP_217813.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 3e-93 | 58 |
| spaI | NP_457288.1 | secretory apparatus ATP synthase (associated with virulence) | Virulence | SPI-1 | Protein | 3e-93 | 58 |
| spaI | NP_806497.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 3e-93 | 58 |
| invC | NP_461815.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 3e-93 | 58 |
| invC | AAS66861.1 | InvC | Not tested | SSR-2 | Protein | 2e-94 | 56 |
| ECs3730 | NP_311757.1 | ATP synthase SpaL | Not tested | LIM | Protein | 2e-92 | 55 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 8e-68 | 48 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 5e-68 | 48 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 1e-68 | 48 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-67 | 48 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 5e-68 | 47 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 4e-68 | 47 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 4e-68 | 47 |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 5e-68 | 47 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 5e-68 | 47 |
| hrcN | AAT96195.1 | HrcN | Virulence | T-PAI | Protein | 4e-54 | 42 |
| hrcN | AAT96141.1 | HrcN | Virulence | T-PAI | Protein | 6e-54 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BTH_II0832 | YP_439029.1 | ATP synthase SpaL | VFG2459 | Protein | 2e-149 | 92 |
| BTH_II0832 | YP_439029.1 | ATP synthase SpaL | VFG0555 | Protein | 1e-93 | 58 |
| BTH_II0832 | YP_439029.1 | ATP synthase SpaL | VFG1778 | Protein | 5e-90 | 57 |
| BTH_II0832 | YP_439029.1 | ATP synthase SpaL | VFG1008 | Protein | 2e-89 | 53 |
| BTH_II0832 | YP_439029.1 | ATP synthase SpaL | VFG0048 | Protein | 1e-71 | 48 |
| BTH_II0832 | YP_439029.1 | ATP synthase SpaL | VFG0390 | Protein | 2e-67 | 45 |
| BTH_II0832 | YP_439029.1 | ATP synthase SpaL | VFG0192 | Protein | 2e-69 | 44 |
