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Name : BTH_II0751 (BTH_II0751) Accession : YP_438948.1 Strain : Genome accession: NC_007650 Putative virulence/resistance : Virulence Product : type III secretion inner membrane protein SctV Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 880103 - 882175 bp Length : 2073 bp Strand : + Note : identified by match to protein family HMM PF00771; match to protein family HMM TIGR01399 DNA sequence : ATGACGCTGAAATCCCTCAAACTTCCCGCCGGCGGCGAGGTCGGCATCACGGTGCTCGTCGTCGCGATCGTGTCGCTGAT GATCCTGCCGCTGCCGCCCGAGGTGATCGACGTGCTGCTCGGCGTGAACATCGCGATCAGCGTCACGCTGCTGATGGTGA CGATGTACGTCGGCAGCATCGTGTCACTGTCGGTGTTTCCGTCGGTGCTGCTGTTCACGACGCTGTACCGGCTGTCGCTG AACATCGCGTCGACGAAGTCGATCCTGCTGCACGCGAACGCGGGCGACATCATCGAGAGCTTCGGCGAGCTCGTCGTCGG CGGCAATCTCGTCGTCGGCCTCGTCGTGTTCCTGATCATCACGACCGTGCAGTTCATCGTGATCGCGAAGGGCTCGGAGC GCGTCGCCGAAGTCGGCGCGCGCTTCACGCTCGACGCGATGCCCGGCAAGCAGATGAGCATCGACGCGGACCTGCGCGCG AACATCCTCACGCCCGACGAGGCGCGCCGCAAGCGCGCGACGCTCGCGAAGGAGAGCCAGCTGCACGGCGGGATGGACGG CGCGATGAAGTTCGTCAAGGGCGACGCGATCGCGGGGCTCATCATCACGCTCGTGAACATCGTCGCGGGCATCGCGATCG GCGTGATGTACCACGGGATGACGGCGGGGGAAGCGGCGAACCGCTTCTCGATCCTGTCGGTCGGCGACGCGATGGTGTCG CAGATCCCGTCGCTCCTGATCTCGGTCGCGGCGGGCGTGATGATCACGCGCGTCGCCGACGATCATGACGAAGGCGAGGG CGCGTCGCTCGGCTCCGAGATCGCGAGGCAACTGGGCGGCAGCCATCGCGCGCTGTATTTCGCGGCGGTGCTGCTGCTCG GCTTCGCCGCGGTGCCGGGCTTTCCGGCGGCGCTCTTCGCGCTGCTGTCGGCGACGCTCGCGTTCGCCGGCTACCGGCTG CACAAGGGCGCGCGCCGCACGACCGCGCGCGGCGAGCCGGTGATCGCGCTGCAGCGCGCGGGCGCGAAGAGCGGCACGCC GTCGATCCTGCCGCGCGCGCCGCTCTTCACGTGCGCGATCGGCGTGCGCGTCGCGCCCGATCTCGTCGCGCGGCTCGCGC CCGCCGCGCTCGACCGCGCGTTCGACGAGGAGCGCGCGAAGCTGCAGGAGGAGCAGGGGCTGCCGTTTCCCGGCATCACG CTGTGGACGAGCGACGCGCTGCCCGAATCGACGTGCGAGATCCTGATGCGCGACGTGCCGCAGACGCGGCTCGAATTGCC GGCCGACCAGACGATGCTGCCCGATGCGGCGTCCGATCCCGCGCTCGCCGGCCGCTGCACGAAACGCGGGCCGGCGGGCG GCCTCGCGCAGAGCTACTGGATCGACGACAAGGCGGCGCCGGCCGGCGTGCGCGCATGGCGCGCCGAGCAGGTGATCGCG CACGAGACGATCGCGCTGCTTAGGCGCAACGCCTATCTGTTCCTCGGCATTCAGGAAACCCAGTGGATTCTCGATCAGCT CGGCCTCGACTATCCGGGGCTCGTCGCCGAGGTGCAGAAGGCGCTGCCGACGCAACGGATCGCCGACGTGCTGCGCCGCC TGCTCGAAGAGCACATCCCGATCCGCAACGCGCGCGACATCATGGAGAGCCTCGTCGCGTGGGGGCCGAAGGAGAAGGAC ATGCTGATGCTCGCCGAATACGTGCGCGGCGACCTGTCGCGCTATCTCGCGTATCGGGCGGCGCGCGGCGCGCGGCAATT GCCGGCGGTGCTGCTCGACATGGCGGTCGAGCAGCACATCCGGCAATCGATCAAGCAGACGCCCGCCGGCAACTTCCTCG CGCTGCCGCCCGAGCAGGTGCGCTACCTGGTCGACAGCGTGGCGTCGTTCGTCGGCGATGCGCCGCGCGACGACGTCGCG CTCGTCACGTCGATGGACGTGCGCCGCTACACGCGGCGGATGATCGAGGCGCGGCTCGGCTGGCTGCCCGTCTATTCGTA TCAGGAGCTGGGCGACCAGGTTCAATTGCAGCCGCTCGGCCGCGTGACGATGCCGCAGGCGGCCCACGCATGA Protein sequence : MTLKSLKLPAGGEVGITVLVVAIVSLMILPLPPEVIDVLLGVNIAISVTLLMVTMYVGSIVSLSVFPSVLLFTTLYRLSL NIASTKSILLHANAGDIIESFGELVVGGNLVVGLVVFLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDADLRA NILTPDEARRKRATLAKESQLHGGMDGAMKFVKGDAIAGLIITLVNIVAGIAIGVMYHGMTAGEAANRFSILSVGDAMVS QIPSLLISVAAGVMITRVADDHDEGEGASLGSEIARQLGGSHRALYFAAVLLLGFAAVPGFPAALFALLSATLAFAGYRL HKGARRTTARGEPVIALQRAGAKSGTPSILPRAPLFTCAIGVRVAPDLVARLAPAALDRAFDEERAKLQEEQGLPFPGIT LWTSDALPESTCEILMRDVPQTRLELPADQTMLPDAASDPALAGRCTKRGPAGGLAQSYWIDDKAAPAGVRAWRAEQVIA HETIALLRRNAYLFLGIQETQWILDQLGLDYPGLVAEVQKALPTQRIADVLRRLLEEHIPIRNARDIMESLVAWGPKEKD MLMLAEYVRGDLSRYLAYRAARGARQLPAVLLDMAVEQHIRQSIKQTPAGNFLALPPEQVRYLVDSVASFVGDAPRDDVA LVTSMDVRRYTRRMIEARLGWLPVYSYQELGDQVQLQPLGRVTMPQAAHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcV | AAP34346.1 | HrcV | Virulence | Hrp PAI | Protein | 2e-149 | 64 |
| XC_3013 | YP_244081.1 | HrcV protein | Virulence | Hrp PAI | Protein | 2e-152 | 64 |
| hrcV | NP_636603.1 | protein HrcV | Virulence | Hrp PAI | Protein | 2e-152 | 64 |
| hrcV | NP_640760.1 | HrcV protein | Virulence | Hrp PAI | Protein | 4e-149 | 64 |
| hrcV | YP_362156.1 | HrcV protein | Virulence | Hrp PAI | Protein | 6e-148 | 63 |
| hrcV | BAB07859.1 | HrcV | Virulence | Hrp PAI | Protein | 7e-146 | 63 |
| hrcV | YP_198723.1 | protein HrcV | Virulence | Hrp PAI | Protein | 9e-146 | 63 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 4e-112 | 43 |
| YPO0266 | YP_002345347.1 | secretion system apparatus protein SsaV | Virulence | Not named | Protein | 8e-87 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BTH_II0751 | YP_438948.1 | type III secretion inner membrane protein SctV | VFG0064 | Protein | 5e-116 | 44 |
| BTH_II0751 | YP_438948.1 | type III secretion inner membrane protein SctV | VFG0384 | Protein | 6e-114 | 43 |
| BTH_II0751 | YP_438948.1 | type III secretion inner membrane protein SctV | VFG0198 | Protein | 2e-104 | 43 |
