|
Name : BTH_II0750 (BTH_II0750) Accession : YP_438947.1 Strain : Genome accession: NC_007650 Putative virulence/resistance : Virulence Product : type III secretion system protein HrcU Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 879024 - 880106 bp Length : 1083 bp Strand : + Note : identified by match to protein family HMM PF01312; match to protein family HMM TIGR01404 DNA sequence : ATGGCCGAAGAGAAAACCGAAGAGCCCACCGAGCGGAAGCTGAAGAAGGCCCGGGAGAAGGGCCAGGTCGCGAAGAGCAA GGACGTCGCGGACGCGGCGACGCTGGCGGCCGCGATCGGCGTGCTGACGGCGGGCGAGGCGATGCTGACGGGCGGCCTGT CGCGCGCGATCCGCACCGCGCTCGATTTCGTGCACGGCGAGCGCACGCCGCAGGCGACGCTCGCCGCGTTGCACGATCTC GCCGCGAGCGCCGGGCTGACGATGCTGCCGTTCGTCGCCGCCGCGATCGTCGCGGGCGTTGCATCGCAAGCGCCGCAGGC GGGTTTCATGATCACGCTCGAACCCGTGATGCCGAAGTTCGACGCGATCAGCCCGATGGCGGGGATCAAGCGGATCTTCT CGACGAAATCGCTGCTCGAGCTCGTGAAGATGATCGTCAAGGCGATCGTGCTCACGTGCGTGATCTGGAAGATGATGACA TCGCTGTTTCCGCTCGTCGTCGCGAGCGTGTACGAGGCGACGCCGCAGCTTTCGCGCGTGCTGTGGACCGTGCTGATGAA ACTGTTCGGCGTCGTCGCGCTCGTCGTCGCGGTGTTCGCCGCGGCCGATTACAAGATCTCGCGCGCGATGTTCATCCGCG ACAACCGGATGACGAAGGAGGAGACCAAGCGCGAGCACAAGGAGAGCGAGGGCGATCCGCACACGAAGGGCGAGCGCCGC CGGCTCGCGCGCGAGATCGCGACGAGCGCGCCGCCGCGGCAGAAGGTCGGCCAGGCGAACGTGCTCGTCGTCAACCCGAC GCACTACGCGGTCGCGATCCGCTACGCGCCCGACGAGCATCCGTTGCCGCGGGTGATCGAGAAAGCCGTCGACGACGGCG CGCTCGCGCTGCGCCGCCACGCGCACGCGCTCGGCGTGCCGATCGTCGGCAACCCGAGCGTCGCGCGCGCGCTGTACCGC GTCGAGCGCGACGCGGCGATTCCCGAAGAACTGTTCGAAACGGTGGCCGCGATCCTGCGCTGGGTCGAGTCCATCTCGGG CGTGCGCGCCGACGCCGCCGTTCCCTGCGCGAGGTCGTCATGA Protein sequence : MAEEKTEEPTERKLKKAREKGQVAKSKDVADAATLAAAIGVLTAGEAMLTGGLSRAIRTALDFVHGERTPQATLAALHDL AASAGLTMLPFVAAAIVAGVASQAPQAGFMITLEPVMPKFDAISPMAGIKRIFSTKSLLELVKMIVKAIVLTCVIWKMMT SLFPLVVASVYEATPQLSRVLWTVLMKLFGVVALVVAVFAAADYKISRAMFIRDNRMTKEETKREHKESEGDPHTKGERR RLAREIATSAPPRQKVGQANVLVVNPTHYAVAIRYAPDEHPLPRVIEKAVDDGALALRRHAHALGVPIVGNPSVARALYR VERDAAIPEELFETVAAILRWVESISGVRADAAVPCARSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcU | BAB07858.1 | HrcU | Virulence | Hrp PAI | Protein | 3e-64 | 46 |
| hrcU | YP_362157.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-62 | 46 |
| hrcU | YP_198724.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 5e-64 | 46 |
| hrcU | AAP34345.1 | HrcU | Virulence | Hrp PAI | Protein | 2e-59 | 45 |
| hrcU | NP_640761.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 3e-61 | 45 |
| XC_3012 | YP_244080.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-57 | 44 |
| hrcU | NP_636604.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-57 | 44 |
