Gene Information

Name : BTH_II2120 (BTH_II2120)
Accession : YP_440308.1
Strain :
Genome accession: NC_007650
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2603271 - 2604740 bp
Length : 1470 bp
Strand : +
Note : identified by match to protein family HMM PF00171; match to protein family HMM TIGR01780

DNA sequence :
ATGACTACAGCTCACGAAACCCTTGCACTGAAAGATCCCGCGCTGCTGCGCGAGCGCGCGTTCGTCGCGGGCGAATGGCA
AGCCGCCGACGGCGGCGCGACGCTCGAAGTCCGCAACCCGGCGACGGGCGCGCTGATCGGCACGGTGCCCGCGATGGGCG
CTGCCGAGACGCGCCGCGCGATCGACGCGGCGAACGCCGCATGGCCCGCATGGCGCAAGAAGACCGCGAAGGAACGCGCG
GCGATCCTGCGCAAATGGCACGACTTGATGATCGCGCACGCGGACGACCTCGCGCTGATCCTGACGACCGAGCAAGGCAA
GCCGCTCGCCGAAGCGAAGGGCGAGATCGGCTACGCGGCGTCGTTCCTCGAATGGTTCGCGGAGGAAGGCAAGCGCGTGT
ACGGCGATACGATCCCGAGCCCGGCGAACGACAAGCGCATCGTCGTGACGAAGGAGCCGGTCGGCGTGTGCGCGGCGATC
ACGCCGTGGAATTTCCCGGCGGCGATGATCACGCGCAAGGTCGGCCCGGCGCTCGCGGCCGGCTGCCCGATCGTCGTGAA
GCCGGCCGAGGCGACGCCGTTCTCGGCGCTCGCGATGGCGGTGCTCGCCGAGCGCGCGGGCGTGCCGGCCGGCGTGTTCA
GCGTCGTCACGGGCGAGCCGAAGGCGATCGGCGGCGAACTCACGTCGAACCCGATCGTGCGCAAGCTGTCGTTCACCGGC
TCGACGCCGGTCGGCCGTCTGCTGATGGCGCAATGCGCGGCGACGGTCAAGAAGGTGTCGCTCGAGCTCGGCGGCAACGC
GCCGTTCATCGTGTTCGACGACGCGGATCTCGATGCGGCGGTCGAAGGCGCGATCGCGTCGAAGTATCGAAACAGCGGGC
AAACGTGCGTATGCACGAACCGCTTCTACGTGCACGAGAAGGTCTACGACGCCTTTGCCGAGAAGCTGACCGCCGCCGTC
GCGAAGCTGAAGGTCGGACTCGGCACCGAGGCGGGCGTCGTGCAGGGGCCGCTCATCAACGGCGCGGCGGTGCAGAAGGT
CGAATCGCACATTGCCGACGCGCTCGACAAAGGCGCGCGCGTGACGACGGGCGGCAAGCGCCACGCGCTCGGCCACGGCT
TCTTCGAGCCGACCGTGCTGACGGGCGTCACGCCCGACATGAAGGTCGCGAAGGAGGAAACGTTCGGCCCGCTCGCGCCG
CTGTTTAAGTTCTCGACCGAAGAAGAAGCGATCCGCTACGCGAACGACACCGAATTCGGCCTCGCCGCGTACTTCTACAG
CCGCGACATCGGCCGCGTGTGGCGCGTCGCCGAGGCGCTCGAATACGGGATGGTCGGCATCAACGCCGGAATCATCTCGA
ACGAGGTCGCGCCGTTCGGCGGCGTCAAGCAATCGGGGCTCGGCCGCGAGGGCTCGCACTACGGGATCGACGATTACGTC
GTGATCAAGTACATGTGCGTCGCGGTGTGA

Protein sequence :
MTTAHETLALKDPALLRERAFVAGEWQAADGGATLEVRNPATGALIGTVPAMGAAETRRAIDAANAAWPAWRKKTAKERA
AILRKWHDLMIAHADDLALILTTEQGKPLAEAKGEIGYAASFLEWFAEEGKRVYGDTIPSPANDKRIVVTKEPVGVCAAI
TPWNFPAAMITRKVGPALAAGCPIVVKPAEATPFSALAMAVLAERAGVPAGVFSVVTGEPKAIGGELTSNPIVRKLSFTG
STPVGRLLMAQCAATVKKVSLELGGNAPFIVFDDADLDAAVEGAIASKYRNSGQTCVCTNRFYVHEKVYDAFAEKLTAAV
AKLKVGLGTEAGVVQGPLINGAAVQKVESHIADALDKGARVTTGGKRHALGHGFFEPTVLTGVTPDMKVAKEETFGPLAP
LFKFSTEEEAIRYANDTEFGLAAYFYSRDIGRVWRVAEALEYGMVGINAGIISNEVAPFGGVKQSGLGREGSHYGIDDYV
VIKYMCVAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 1e-150 68