Gene Information

Name : BTH_II1765 (BTH_II1765)
Accession : YP_439959.1
Strain :
Genome accession: NC_007650
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2131971 - 2132738 bp
Length : 768 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGGCTCCGAAGCCGCGCTTTAAGCCCCCGCTAAGCCTCCACCGCTTATCATTCCCGCAAGCGGCCCGCACACGCACGCG
CCGCACTCTGACGGAACCACCAAACATGCGCGTATTGCTCGTCGAAGACGATCCGCTCATCGGCAGCGGACTTGAACAAG
GGCTGAAGCAGGAAGGCTTCGCGGTCGACTGGGTGCAAAACGGCGACGCGGCGACGCTCGCGCTGCGCACGACGTCGTAC
GGGCTGCTGCTGCTCGATCTCGGCCTGCCGGACAAGGACGGCCTCGCGGTGCTCGCCGCGCTGCGCCGGCGCGACGACGC
GCTGCCCGTGATCGTCGTCACCGCGCGCGACGCGCTGCCCGACCGGATCGCCGGCCTCGACTGCGGCGCCGACGACTACC
TCGTCAAGCCGTTCGCGCTCGAAGAGCTGCTCGCGCGCATCCGCGCGGTGAACCGCCGCCAGACCGGCCGCGCGCAGACA
GTGCTCACGGTCGGCGCGCTGCGGCTCGATCCGGCGCGCCATCAGGTGTGGCGCGGCGGCGACGAAGTCGCGCTGTCGCC
GAAGGAATTCGTGCTGCTGCACGAGCTGATGCGCGAGCCGGGCGCGGTGATCTCGCGCGAGCAGTTCGAAGAGCGGCTGT
ACAGCTGGGGCGAGGAAATCGAAAGCAACGCGGTGCAGGTTCACATTCACAACCTGCGCAAGAAGCTCGGCCACGACACG
ATTCTCACGGTGCGCGGCGTCGGCTACCGGATCGGAGACGGCGCATGA

Protein sequence : 
MAPKPRFKPPLSLHRLSFPQAARTRTRRTLTEPPNMRVLLVEDDPLIGSGLEQGLKQEGFAVDWVQNGDAATLALRTTSY
GLLLLDLGLPDKDGLAVLAALRRRDDALPVIVVTARDALPDRIAGLDCGADDYLVKPFALEELLARIRAVNRRQTGRAQT
VLTVGALRLDPARHQVWRGGDEVALSPKEFVLLHELMREPGAVISREQFEERLYSWGEEIESNAVQVHIHNLRKKLGHDT
ILTVRGVGYRIGDGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-34 50
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BTH_II1765 YP_439959.1 DNA-binding response regulator BAC0197 Protein 8e-27 43
BTH_II1765 YP_439959.1 DNA-binding response regulator BAC0083 Protein 5e-27 42
BTH_II1765 YP_439959.1 DNA-binding response regulator BAC0125 Protein 2e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BTH_II1765 YP_439959.1 DNA-binding response regulator VFG0473 Protein 2e-40 52
BTH_II1765 YP_439959.1 DNA-binding response regulator VFG0596 Protein 6e-23 41
BTH_II1765 YP_439959.1 DNA-binding response regulator VFG1390 Protein 1e-22 41