Gene Information

Name : BTH_II0116 (BTH_II0116)
Accession : YP_438318.1
Strain :
Genome accession: NC_007650
Putative virulence/resistance : Virulence
Product : fimbrial chaperone protein ecpD
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 133543 - 134268 bp
Length : 726 bp
Strand : +
Note : identified by match to protein family HMM PF00345; match to protein family HMM PF02753

DNA sequence : 
ATGAGCGCCGCCGTGGCGGCAGCGGCGTGTTGCCTGGCTTCGACCTTGTCCCAGGCTGCGATTGTCATCACCGGAACCCG
CGTCGTTTATCCGGAAAGCAGTCGCGAAGTCAACGTTCGTCTCACTAACGTCGAGCAGTCGCCGGTGTTGGTGCAGGCGT
GGATCGACGACGGAAACGCGGGGGCGAGCCCGGACGAGATCAAGGTGCCGTTCGTTCTCATGCCGCCCGTATTTCGCGTC
GAACCCAAGAAGGGGCAGACGTTGCGCGTCATGTATACAGGCGACGATCTGCCGAAGGATCGCGAGTCGGTGTACTGGTT
GAACGTCCTGGAAATTCCCCCAAAGCCGACCGTGGAAGCCGAGCAAAACCTGTTGCAGCTCGCGTTTCGCACGCGCATCA
AACTGTTTTTCCGCCCGTCGGCGCTGGAAGACGGGAACGCGGCGCAGGCGCGCGATCAGCTTACGTGGAAGGTCGTTCGC
AATGACAAGGGCGTCACCGTGCTGCGCGCGGAAAATCGTTCTCCTTATTACATCTCGCTGAGCCAGGTGACGGCCAAGAG
CGGCGAAAAAAGCACGCAGTTCGATCCGGGCATGGTTTCTCCATTCGGCAGCCGGGATTTCGTGAGCAAGCGGGACACGT
CGACGCTTTCCGCGCATGCCGAGATTTCCTACAAGCTGCTCAATGACTACGGAGCGGAAGTGGCGGGCACGGCAACCGCG
GAATAA

Protein sequence : 
MSAAVAAAACCLASTLSQAAIVITGTRVVYPESSREVNVRLTNVEQSPVLVQAWIDDGNAGASPDEIKVPFVLMPPVFRV
EPKKGQTLRVMYTGDDLPKDRESVYWLNVLEIPPKPTVEAEQNLLQLAFRTRIKLFFRPSALEDGNAAQARDQLTWKVVR
NDKGVTVLRAENRSPYYISLSQVTAKSGEKSTQFDPGMVSPFGSRDFVSKRDTSTLSAHAEISYKLLNDYGAEVAGTATA
E

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 5e-47 46
unnamed CAD33727.1 putative F17-like fimbrial chaperone Virulence PAI I 536 Protein 2e-39 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BTH_II0116 YP_438318.1 fimbrial chaperone protein ecpD VFG0007 Protein 1e-39 45
BTH_II0116 YP_438318.1 fimbrial chaperone protein ecpD VFG1468 Protein 1e-39 42