Gene Information

Name : glnA (HCH_01036)
Accession : YP_432343.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 1037234 - 1038640 bp
Length : 1407 bp
Strand : -
Note : TIGRFAMsMatches:TIGR00653

DNA sequence :
ATGTCAGAGAAAACTCTGAATCTTATTAAAGAGCACGAAGTTAAATGGGTTGACATGCGCTTTACCGACACCAAGGGTAA
AGAGCAGCACGTGACTATCCCTGCTAGCGAAATCTCTCCGGAATTCTTTCAAGAAGGCAAAATGTTTGACGGTTCCTCCA
TCGCTGGCTGGAAAGGCATCAACGAGTCAGACATGATTCTGCTGGCGGACGACGAAACTGCGGTTATTGATCCGTTCACA
GAAGAGACCACCCTGAACCTGACCTGTAACATTATCGAACCCACCACCATGCAGGGTTACAACCGCGACCCACGCTCTAT
CGCACAGCGCGCGGAAGAGTACCTGAAGTCCACGGGCATTGCGGACACTGTACTGTTCGGACCAGAGCCTGAGTTCTTCA
TTTTCGACAGCGTAAAATGGAAGTCCGACATCAACGGCGCCATGTACGAAATCTACTCTGAAGAAGCCGCCTGGGTATCT
GGCGACGACTTCGAGAAAAACAACGTTGGTCACCGTCCCGGCGTAAAAGGCGGCTACTTCCCTGTACCTCCGGTCGACTC
TCTGCATGACCTGCGCGGCGCGATGTGCGCAGCGATGGAATCCATGGGCTTGACCATCGAAGTACACCACCACGAAGTAG
GCACCGCAGGTCAGTGTGAAATCGGCGTTGGCGCCAATACTCTGACCCGCAAAGCGGACGAAGTGCAAATTCTGAAGTAC
TGCGTACACAACGTAGCGCATGCTTACGGCAAGACCGCAACCTTTATGCCCAAGCCTTTGGTTGGCGATAACGGTTCTGG
CATGCACTGTCACCAGTCCCTGTCCAAAGACGGCAAAAACATCTTCTCCGGCGACGGCTATGCAGGTCTTAGCGACATAG
CTTTGTACTACATCGGCGGCATCATCAAGCATGCTCGCGTACTGAACGCTTTCACCAACCCTTCCACCAACGCATATAAG
CGTCTGGTTCCTGGTTTTGAAGCGCCGGTTATGCTGGCTTACTCCGCACGTAACCGCTCTGCGTCCATCCGTATTCCTTT
CGTGACCAACCCGAAAGCGCGCCGGATCGAAGTTCGCTTCCCAGACCCATCCGCCAACCCTTACCTGGCCTTCGCGGCCA
TGTTGATGGCGGGTCTGGACGGCATCCAGAACAAGATCCACCCTGGCGACGCTATGGACAAGGATCTGTACGATCTGCCG
AAAGAAGAAGCCATGAACATCCCAACTGTTTGTAGCTCTCTATCACAAGCTCTGGATTACGCAGAAAAAGACTTCGAGTT
CCTGACTAAAGGCGACGTGTTCACTAAGGACATGATCGAAGCTTACATTGAGTTGAAGCGTAAAGAAGTAGAACGTCTGG
ACATGACCACTCACCCGGTCGAGTTCGAGATGTACTACTCTGTATAA

Protein sequence :
MSEKTLNLIKEHEVKWVDMRFTDTKGKEQHVTIPASEISPEFFQEGKMFDGSSIAGWKGINESDMILLADDETAVIDPFT
EETTLNLTCNIIEPTTMQGYNRDPRSIAQRAEEYLKSTGIADTVLFGPEPEFFIFDSVKWKSDINGAMYEIYSEEAAWVS
GDDFEKNNVGHRPGVKGGYFPVPPVDSLHDLRGAMCAAMESMGLTIEVHHHEVGTAGQCEIGVGANTLTRKADEVQILKY
CVHNVAHAYGKTATFMPKPLVGDNGSGMHCHQSLSKDGKNIFSGDGYAGLSDIALYYIGGIIKHARVLNAFTNPSTNAYK
RLVPGFEAPVMLAYSARNRSASIRIPFVTNPKARRIEVRFPDPSANPYLAFAAMLMAGLDGIQNKIHPGDAMDKDLYDLP
KEEAMNIPTVCSSLSQALDYAEKDFEFLTKGDVFTKDMIEAYIELKRKEVERLDMTTHPVEFEMYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 4e-98 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_432343.1 glutamine synthetase, type I VFG1399 Protein 2e-109 54