Gene Information

Name : HCH_06763 (HCH_06763)
Accession : YP_437813.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Unknown
Product : PBSX family phage portal protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG5518
EC number : -
Position : 6878143 - 6879135 bp
Length : 993 bp
Strand : -
Note : TIGRFAMsMatches:TIGR01540

DNA sequence :
ATGAGCAAACCGACTTCCCCGACTGCGTTTAGCTTTGGCGCGCCCGAGGCTGTTTTAGACACGACGCTGACCTCTTACCT
GGGCGTGTTCCTGAATCCCCATGGCGACTACTACGCGCCCCCGGTCAGTCTTACCGGGCTGGCCAAGCTGCTACGCGCCA
ACGCCCATCACGGGACCATTCCCTATTTTAAGCGCAACATGCTGCGCAAGTTTTACGTACCGTCGCCCGTGCTCAGCGCC
ACGGATCTGGAGAACGCCGGCTTCGATTATCTGGTGTTTGGCATGTGCTACTTTCAGAAGCTCTTTAACCGCCTGGGGCA
GATCGTCCGCCTGCAACACATTCCCGCGTTGAACATGCGGCGCATGAAAGCGCTGGACCAGTTCTGTTTACTGCAACCTA
ACCAGGTGGACCCGTTAGCGTTTCGTCCGGGGGAAATCATTCAGTTAAAAGAGTACGACGTTAACCAGCAGATCTATGGC
GTCCCGCAATACCTGGGCGGTTTGCAGTCCGTTCTACTGAATGAAAGCGCAACGCTATTTCGGAGGAAGTACTACAACAA
CGGCGCGCACATGGGCTTCATCTTCTACACCGCTGACGCGCAGCTGGACCCGGAAGACGAACAATCCCTGAAAGAACAAA
TCCGCGCCAGTAAGGGCGTGGGCAATTTTAGAAGTCTGTATATCAACATACCCGGCGGCAAACCCGACTCCGTGAAAATC
ATCCCCGTTGGCGATATCGCCACCAAAGACGAGTTTGAACGGGTCAAGAATCTAAGCCGCAACGATGTATTGAGCATGTG
GCGCATCCAGCCCGCGCTGGCCGGCATCATGCCGGAAAATACCGGAGGCTTTGGGGATATAGAAAAGATCAGCCGGGTTT
ATTACGAAAACGAGGTTGTCCCTATGCAGCATGTGTTTTTAAAACTTAATGAGGATTTGTCTAACCCAAAGCAGATTCGC
TTTCTCAATCCATCACAAGGGGTGGGTAATTAA

Protein sequence :
MSKPTSPTAFSFGAPEAVLDTTLTSYLGVFLNPHGDYYAPPVSLTGLAKLLRANAHHGTIPYFKRNMLRKFYVPSPVLSA
TDLENAGFDYLVFGMCYFQKLFNRLGQIVRLQHIPALNMRRMKALDQFCLLQPNQVDPLAFRPGEIIQLKEYDVNQQIYG
VPQYLGGLQSVLLNESATLFRRKYYNNGAHMGFIFYTADAQLDPEDEQSLKEQIRASKGVGNFRSLYINIPGGKPDSVKI
IPVGDIATKDEFERVKNLSRNDVLSMWRIQPALAGIMPENTGGFGDIEKISRVYYENEVVPMQHVFLKLNEDLSNPKQIR
FLNPSQGVGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 3e-59 45
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 3e-59 45
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 5e-57 43