Gene Information

Name : HCH_06618 (HCH_06618)
Accession : YP_437677.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 6738661 - 6739320 bp
Length : 660 bp
Strand : +
Note : COG0745

DNA sequence : 
ATGCGCATTTTATTGGTGGAGGATGACGAGTTACTGGCCGACGGTATCCAGACCAGCTTGAGTCAACAGGCCAACACCGT
GGACTGGGTGGCCTCTGGCGAGGCTGCGCTGCACGCCCTGAAACTGGAGCAATTCCATCTCGTCATTCTGGACCTGGGGC
TGCCCGACATCGACGGCCTCACCGTATTGAAACGCCTGCGCGATCGCGGCGATGAGATCCCCGTTCTGATTCTCAGCGCC
CGCGACCAGGTACAGGATCGGGTCAAAGGCCTCGACGCCGGAGCCGACGACTATCTGCTGAAACCCTTTGACGTCAGCGA
GCTGAAAGCCCGTTTGCGCGCACTCAGCCGGCGTGGTTCCGGTAATGCGCATCCGGAAATCCAGCTCGCCAACATCCGCA
TTCTGCCCTCTTCCTATCAGGTTTATAAAAGCGCTGAGGAAGTGCGCCTGTCGCGCCGGGAATACGCGCTCCTGTATGAG
CTCGCCTCTCATCGCGGCAGGGTGCTGTCCAAAGACCAGTTGGAAGAGCTCGTCTATGGCTGGTCCGATGATGTGTCCAG
CAACACCATGGAAGTCCATATTCACAACCTGCGCAAAAAGCTCAACCCCGACCTGATTAAAACCGTTCGCGGCATGGGTT
ATATGATCGAGAAGGAATAA

Protein sequence : 
MRILLVEDDELLADGIQTSLSQQANTVDWVASGEAALHALKLEQFHLVILDLGLPDIDGLTVLKRLRDRGDEIPVLILSA
RDQVQDRVKGLDAGADDYLLKPFDVSELKARLRALSRRGSGNAHPEIQLANIRILPSSYQVYKSAEEVRLSRREYALLYE
LASHRGRVLSKDQLEELVYGWSDDVSSNTMEVHIHNLRKKLNPDLIKTVRGMGYMIEKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-34 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_06618 YP_437677.1 response regulator BAC0487 Protein 3e-30 47
HCH_06618 YP_437677.1 response regulator BAC0197 Protein 2e-28 41
HCH_06618 YP_437677.1 response regulator BAC0638 Protein 1e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_06618 YP_437677.1 response regulator VFG0473 Protein 3e-34 45
HCH_06618 YP_437677.1 response regulator VFG1389 Protein 6e-24 41