Gene Information

Name : HCH_06574 (HCH_06574)
Accession : YP_437636.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Virulence
Product : cobalamin/Fe3+-siderophores ABC transporter ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 6701069 - 6701929 bp
Length : 861 bp
Strand : +
Note : COG1120

DNA sequence : 
ATGTCCGAGCCAAGACTTGCAATTCAGAACGTCTCCCTCAGCTACGCGAACGGGCGCGGCGGCGGCGCGAAAGCCGACTC
CGCGCCGACAGTGAAAGAAGTCAGCCTGCAGGCCAGACCGGGAGAACTGATGATCATCGTTGGCCCCAACGGCTGTGGTA
AGTCCACACTGCTACGGGCAGTGGCGCGTCTGCACAGGCCGGATTCCGGCCGTATCCTGCTGGAGGGCGAGGACATCTGG
AGCTTGAGCAGGAAACAGGCCGCCACGCGTCTGGCCTTGCTGCCGCAAACGCCCACCGCGCCCGAGGGCATCCGCGTGGC
GGATCTGGTGCGTCACGGCCGTCACCCGCATCAGGGATTGTTCCGTCAGTGGACCAGCGCCGATGAAGACGCCGTCCGTC
GCGCTCTGCTCGCCACCGACACCGCGGATCTGATGGACGCGCCGCTGGATCACCTCTCCGGCGGGCAACGCCAACGCTGC
TGGCTGGCCATGGCGCTGGCGCAGGAAACCAACCTGTTACTGCTGGACGAACCCATCAGCATGCTCGATCTGGGGCATCA
GGTGGAAGTGTTGAATCTGGTCCGCGATCTGGCCGCCAAGGGCATCACTATCATGATGGTGCTGCACGATCTGATCGCCG
CCGCGCGCTACGCCGACACCCTGACCGCCATGCGCGACGGCCGTCTGGTGGCGAGTGGTCCACCCCGGGAGATTCTGACC
CGGCGAATGGTGCGTGATCTCTACAATGTCGATGCGCATATTCTCAGCGATCCCGACGGCAATCCGGTGGTCACGCCTGC
GGTAGGCGGCGCTTTTTCTTCCCTGTCCCCCTCCAACAGCAAGGAGCAATCTTATGTCTGA

Protein sequence : 
MSEPRLAIQNVSLSYANGRGGGAKADSAPTVKEVSLQARPGELMIIVGPNGCGKSTLLRAVARLHRPDSGRILLEGEDIW
SLSRKQAATRLALLPQTPTAPEGIRVADLVRHGRHPHQGLFRQWTSADEDAVRRALLATDTADLMDAPLDHLSGGQRQRC
WLAMALAQETNLLLLDEPISMLDLGHQVEVLNLVRDLAAKGITIMMVLHDLIAAARYADTLTAMRDGRLVASGPPREILT
RRMVRDLYNVDAHILSDPDGNPVVTPAVGGAFSSLSPSNSKEQSYV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-47 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-47 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 8e-47 44
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-47 44
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-53 42
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-41 42
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-49 42
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-49 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-45 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_06574 YP_437636.1 cobalamin/Fe3+-siderophores ABC transporter ATPase BAC0164 Protein 2e-41 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_06574 YP_437636.1 cobalamin/Fe3+-siderophores ABC transporter ATPase VFG0925 Protein 2e-52 44
HCH_06574 YP_437636.1 cobalamin/Fe3+-siderophores ABC transporter ATPase VFG1042 Protein 2e-41 42