Gene Information

Name : HCH_06564 (HCH_06564)
Accession : YP_437627.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Virulence
Product : 2,3-dihydroxybenzoate-AMP ligase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG1021
EC number : 2.7.7.58
Position : 6686415 - 6688085 bp
Length : 1671 bp
Strand : +
Note : TIGRFAMsMatches:TIGR02275

DNA sequence : 
ATGTCCGCGAGCATGGAGCAGCCGCAAATCGAACTCACGCCCTGGCCGGAGGCTGAGGCGGAGCTGTATCGCGCCGCCGG
CTACTGGACCGGTGACGTTCTGGGAAGCATCCTGAGCCGCGGCGCTCAGGCGTTCGGCGACCGCACCGCGGTGATCGCCG
GCGAGCGTTCCTGGACTTATGGCGATCTTAACGCCAGGGCGGATCAGTTGGCATCAGGATTAAATACCCTCGGAATTACT
CCGGGTTCCAAGGTCGTGGTGCAACTGCCTAACATCGGCGAATTCATCGAAGTGATTTTTGCGCTGTTTCGCCTGGGCGC
GGCGCCGATCATGGCCCTGCCCACCCACCGCTACGCCGAGATCAGTTACTTTTGCGAATTCGCCGACGCCGTCGCCTATA
TCGCACCAGCTAAATCCGGCGGATTCGACTATCGCGACATTGGTAAAAAGTTGAAAGACGAAGGACTCGTGCGACAGGTC
ATCATCGCCGGCGATGCAGGCGATTTCGTCCCTCTCGACGGCTTATATCAAGCGCCTGGCGCGGCGCCGGAGATAGATCC
GTCCGCCATCGCGCTGTTGCAGTTGTCCGGCGGCACCACCGGCATGTCCAAGCTGATTCCGCGCACCCACGACGACTACC
TTTACAGCGTGCGCGCCAGCGCCGAGATTTGCGGTCTGTCGCCGCAAACAGTGTATCTCGCCGTACTGCCTGCAGCGCAC
AACTTTCCACTCAGCTCGCCCGGTGTGCTCGGCGTCCTCTATGCGGGAGGAACCGTGGTGCTGTCCGAATCCGGCGCGCC
GGATATCGCGTTTCCGTTGATCGCCCGCCACCGCGTCACCATGACCGCCATGGTGCCGCCGCTGGCGCTGGCCTGGATGA
CCGCCTGCGACAATCTGAAGAAATCCGGCGCGCCGCCGGATCTGTCCAGCCTGCAGGTATTGCAGGTGGGCGGCGCCAAG
TTTACTGAAGAAGCCGCCCGCCGCGTCACGCCGGTGCTGGGTTGCAAGCTGCAGCAGGTGTTCGGCATGGCGGAAGGCCT
GGTGAACTACACCCGTCTGGATGACGACATCGACACCGTCGTCACCACTCAGGGTCGCCCAATATCTCCAGCGGATGAAG
TGCGCATCGTGGACGAAGACGACCAGCCAGTGGCGCCCGGCGCAACCGGGCTGTTGCTGACCCGCGGCCCCTACACCATT
CGCGGTTATTTCAAAGCGGCGGAGCATAACGCCAAGTCCTTCACCGCCGATGGTTTCTATCGCACCGGCGATGTGGTGCG
CCTGACCGACGCCGGTTATCTGGTGGTGGAAGGTCGCGCCAAAGACCAGATCAATCGCGGCGGCGAGAAAGTGGCGGCGG
ACGAGCTGGAGAATCATCTGCTGGCGCACCCGCTGGTGCATGACGCTGCGGTAGTGGCGATGCCTGACCCCTACCTGGGC
GAGCGCACCTGCGCCTACGTCATTCCGCAGAATCATGCCGCCGCGCCTGAGCAACGCCCGCGCCCGCAGGATCTGCTCAA
ATTTCTGCGCGAGCGCGATCTCGCCGTGTTCAAGATTCCGGACCGCATCGAGTTTATCGACGCCTTCCCCAAGACCCGCC
TGGGCAAGGTGGACAAGAAAGCCCTGCGCCAGATGATCGCGGAAAAAATTGCGCCGCCCACCGTGGCTTAA

Protein sequence : 
MSASMEQPQIELTPWPEAEAELYRAAGYWTGDVLGSILSRGAQAFGDRTAVIAGERSWTYGDLNARADQLASGLNTLGIT
PGSKVVVQLPNIGEFIEVIFALFRLGAAPIMALPTHRYAEISYFCEFADAVAYIAPAKSGGFDYRDIGKKLKDEGLVRQV
IIAGDAGDFVPLDGLYQAPGAAPEIDPSAIALLQLSGGTTGMSKLIPRTHDDYLYSVRASAEICGLSPQTVYLAVLPAAH
NFPLSSPGVLGVLYAGGTVVLSESGAPDIAFPLIARHRVTMTAMVPPLALAWMTACDNLKKSGAPPDLSSLQVLQVGGAK
FTEEAARRVTPVLGCKLQQVFGMAEGLVNYTRLDDDIDTVVTTQGRPISPADEVRIVDEDDQPVAPGATGLLLTRGPYTI
RGYFKAAEHNAKSFTADGFYRTGDVVRLTDAGYLVVEGRAKDQINRGGEKVAADELENHLLAHPLVHDAAVVAMPDPYLG
ERTCAYVIPQNHAAAPEQRPRPQDLLKFLRERDLAVFKIPDRIEFIDAFPKTRLGKVDKKALRQMIAEKIAPPTVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtE CAA21394.1 - Virulence HPI Protein 9e-115 51
ybtE AAA93464.1 yersiniabactin 2,3-dihydoxybenzoate-AMP ligase Virulence HPI Protein 6e-115 51
irp5 YP_002346898.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 9e-115 51
ybtE NP_669710.1 salicyl-AMP ligase Virulence HPI Protein 9e-115 51
ybtE NP_993003.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 9e-115 51
ybtE YP_070120.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 9e-115 51
irp5 CAA73130.1 Irp5 protein Virulence HPI Protein 7e-114 50
irp5 YP_001006819.1 yersiniabactin siderophore biosynthetic protein Virulence HPI Protein 9e-114 50
ybtE YP_853079.1 yersiniabactin siderophore biosynthetic protein Virulence PAI IV APEC-O1 Protein 1e-114 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_06564 YP_437627.1 2,3-dihydroxybenzoate-AMP ligase VFG0168 Protein 3e-133 52
HCH_06564 YP_437627.1 2,3-dihydroxybenzoate-AMP ligase VFG1817 Protein 7e-115 48
HCH_06564 YP_437627.1 2,3-dihydroxybenzoate-AMP ligase VFG0932 Protein 2e-113 46