Gene Information

Name : istB4 (HCH_06334)
Accession : YP_437405.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Unknown
Product : IS21 family helper protein IstB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 6473606 - 6474361 bp
Length : 756 bp
Strand : -
Note : DNA replication protein; COG1484

DNA sequence :
ATGCTGAAACATCCCACACTGGATAAACTCCACGCTCTCAAGTTAACCGGCATGGCCGCCGCCCTGGAGGATCAGTCGGC
CACCCCCGACATCAGCGACCTGAGCTTCGAGGAGCGCCTTGGATTGCTGGTCGACCGGGAAATGACCGAGCGGGACAACC
AGCGCATGAGCAGCCGGTTGCGCCGGGCCAAGCTGCGACACGCCGCCATCCTCGAAGACCTGGATTACCGGAACTCACGA
GGCCTGGATAAAGGACTGGTCCAGTCACTGGCTGGATGCCAGTGGGTAAAGGAGCGCCTGAACGTGCTCATCACCGGCCC
CACCGGGGTCGGCAAAACCTGGTTGGCCTGCGCCCTGGCGCATAAGGCCTGCCGGGAAGGCTACACCGCACAGTATGTGC
GCCTGACCCGACTGTTGCGGGAGCTGATCATTGCCAAAGGCGACGGCCAATACTCGAAACTCCTGACCAGCCTCGCCAAG
GTTGACGTGCTGATCCTGGATGACTGGGGGCTGATGAAGCTGAGCGCGGAGAACCGAAGAGACTTGCTGGAGGTTCTGGA
AGACCGGCACGGAGGGCGCTCCACCATCGCCACTAGCCAATTACCCATTGAGGAATGGCACGGACTGATCGGTGACGCGA
CCCTCGCAGATGCCATTCTGGATCGTCTGGTTCACAACGCCTACAAGATCAATCTCAGGGGCGAGTCCATGCGGAAACAG
CAGGCAAAGTTGACGGGCGCCGAGACTTTGGAGTAA

Protein sequence :
MLKHPTLDKLHALKLTGMAAALEDQSATPDISDLSFEERLGLLVDREMTERDNQRMSSRLRRAKLRHAAILEDLDYRNSR
GLDKGLVQSLAGCQWVKERLNVLITGPTGVGKTWLACALAHKACREGYTAQYVRLTRLLRELIIAKGDGQYSKLLTSLAK
VDVLILDDWGLMKLSAENRRDLLEVLEDRHGGRSTIATSQLPIEEWHGLIGDATLADAILDRLVHNAYKINLRGESMRKQ
QAKLTGAETLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3529 YP_854246.1 ISEc12 ATP-binding protein Not tested PAI I APEC-O1 Protein 8e-51 51
unnamed CAC39295.1 hypothetical protein Not tested LPA Protein 3e-51 51
ORF_5 AAZ04416.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 3e-51 51
VPI2_0004c ACA01821.1 IstB protein Not tested VPI-2 Protein 8e-45 49