Gene Information

Name : HCH_06333 (HCH_06333)
Accession : YP_437404.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Unknown
Product : superfamily II DNA/RNA helicase
Function : -
COG functional category : S : Function unknown
COG ID : COG4951
EC number : -
Position : 6470953 - 6473379 bp
Length : 2427 bp
Strand : -
Note : COG1061

DNA sequence :
ATGAATGACGCTCGCTACCAAGATATATCTGCTATTGATAACAGGCTAGTTGAGCTTGAAAACGAAAAGCAGCAGCTCCT
CGCGCTAAGAGACTCTTTGCTTGACGCTCAAAGCGATCGTCCGATACAGACATTTTCCCCAGAGCAAAAAATTGCCATCT
TCAGACAACTATTCCGCGGACGAGAGGATATCTTCGCCAACCGTTGGCAAAACAAGCAGGGTCGCAGTGGCTATGCCGTT
GCTTGTGACAATGAGTGGATCGCAGGAGTCTGCAACAAGCCCCGCATAAAGTGCCAAGACTGTACGCACCGAAAATTTAG
TGAATTAAACGAACAAACTATTTATCGCCATCTTGCCGGTCATCAAGTCGTTGGCCTTTATCCGTTATTGAAAGACAATA
CTTGTTATTTGTTGGCAGCTGATTTTGACAAAGGCTGTTGGCAAGAAGAAGTCAAAGCGATGTCCAGAGCATGCCAAGAA
TTCGATATTCCCCATGCCATAGAAATCTCGCGTTCAGGCAACGGAGCGCACTTATGGATATTTTTTGAAACCAATATTCC
TGCCAACCAAGCTCGGGCATTAGGTTTTTCGTTGCTTGATAAGGCGATGGAAATATTTCCAAATCTTTCGTTTGGCTCTT
ATGACAGGCTATTTCCGAACCAAAATTTTCTTCCTGAGGGCGGATTTGGCAATCTCATTGCGTTACCACTTCAAAAAGAA
GCTCGGCTTTCAGGCCATAGCTGTTTTGTCGATAGCGAGTTAAATACCATTGACGATCAATGGCTGTATCTTTCTGAGCT
TAAAACGCTAACTCAATCACGTGTTGATAAGCTCATCACGACAACTTCACCAAATACCCTATTACTGTCTGAACAAGGGC
TAGCAGACAACCGCCCTCCGTGGGAAATTACCGCCAAAACCGCCCCAATTAAATTAGAGCATCCGCCAAAAAGCATTACC
ATCACCCTTGCGAACTACATCTATTTTTTGATGAGCGATTTACCTGGGCCGCTGCTGGCAGGGCTAAAGCGATTGGCCTG
CTTTTCGAATCCAGTGTTTTTTAAAACGCAAGCGTTACGATTTTCCACTCATGGCATTCCAAGATTTATTTCTTGTGCAC
ACATTGAAAACGGTTATTTAGCACTACCGCGGGGCTGTCTCGATGAAGCGATAGCTTTGTTACAAGAACACAATATCTCT
ATGCAATTTGACGATAAGCGCGAAGCAGGCAAACCACTCATCAAACTTGCTCCTACCTTTACATTGCGAAAAAACCAGCG
TGAAGCGGTAGCCGCTATCAGTAAGCATGACTTCGGTATCTTGCATGCCCCAACGGCATTTGGAAAAACGGTTACAGCCA
TTGGCATGATCGTAAAACGAAAAGTAAACACGCTGATCCTTGTCCATAGCCGTCAACTGCTTGAGCAATGGCACGAGCGA
TTACGCACATTTTTGCCTGATGTGAACATTGGAAGTGTAGGTGGAGGCAAAAGAAAACCGAGTGGCGTTATCGATATTGC
CACTTATCAAAGCTTGGTCAATAAGAAGGACAACTCAATATCACATTTAATACAGGCCTACGGCCATATCATTGTCGATG
AATGCCATCACCTATCAGCGCCAAGGTTTGAAATGGTGCTCAACGAGGTAAGAGCAAAATATGTGTTGGGTCTAACAGCG
ACACCAGAGAGACAAGATGGGCGCCAAAAAATCATTTTTATGGCGGCAGGTCCAATTCGCTACAAAGTTAAAAGCAGCAC
TGACGAACAGTTTACTCAGACAGTCATCATACATCAGTTCTACGATGCACCGCCTGCCGAGTTAGTACAAACAGATGAAC
GACCAAAAATAACCGATGCCTACCGTTGGCTTGTCGATAATGAATGCCGCACGTCAAAGATTATCTCCGACGCATTCCAG
TGTGTTCAAAATGGCGGACACCCGTTAATACTAACAGAACGGAGAGAGCACGCTGAGTACATACACACTCAACTTGTCGA
GATGGATATTAACGCCATCGTGCTGAAAGGGGCTATGAAAGCTGCGGAGCGAAAGAACGCAGACAATCATCTGCAATCTG
CTCAAGTCGTCGTCGCAACAGGAAAATATGTCGGTGAAGGATTTGACCTTCCCAGATTGGATACTTTGTTTTTGGCCATG
CCAATCGCATGGAAAGGTACTTTGGCTCAATATGCGGGTCGTATCCATCGTGAATCTGAAGGAAAAACACAAGTGACGAT
TCACGACTATGTGGACTGCGCACTACCTATGTTGCAACGCATGTTTAAGAAACGAGAGAAAAGCTACAAAGCAATGGGCT
ACACCCTTCAATATGTTGGTAACGACAATAACAACCAGCCCACGGCACGGGCCCCAAATGCCCAAGTGGCGATAAGTTAC
TTTAAACTTATGGCTAAATATGTATAA

Protein sequence :
MNDARYQDISAIDNRLVELENEKQQLLALRDSLLDAQSDRPIQTFSPEQKIAIFRQLFRGREDIFANRWQNKQGRSGYAV
ACDNEWIAGVCNKPRIKCQDCTHRKFSELNEQTIYRHLAGHQVVGLYPLLKDNTCYLLAADFDKGCWQEEVKAMSRACQE
FDIPHAIEISRSGNGAHLWIFFETNIPANQARALGFSLLDKAMEIFPNLSFGSYDRLFPNQNFLPEGGFGNLIALPLQKE
ARLSGHSCFVDSELNTIDDQWLYLSELKTLTQSRVDKLITTTSPNTLLLSEQGLADNRPPWEITAKTAPIKLEHPPKSIT
ITLANYIYFLMSDLPGPLLAGLKRLACFSNPVFFKTQALRFSTHGIPRFISCAHIENGYLALPRGCLDEAIALLQEHNIS
MQFDDKREAGKPLIKLAPTFTLRKNQREAVAAISKHDFGILHAPTAFGKTVTAIGMIVKRKVNTLILVHSRQLLEQWHER
LRTFLPDVNIGSVGGGKRKPSGVIDIATYQSLVNKKDNSISHLIQAYGHIIVDECHHLSAPRFEMVLNEVRAKYVLGLTA
TPERQDGRQKIIFMAAGPIRYKVKSSTDEQFTQTVIIHQFYDAPPAELVQTDERPKITDAYRWLVDNECRTSKIISDAFQ
CVQNGGHPLILTERREHAEYIHTQLVEMDINAIVLKGAMKAAERKNADNHLQSAQVVVATGKYVGEGFDLPRLDTLFLAM
PIAWKGTLAQYAGRIHRESEGKTQVTIHDYVDCALPMLQRMFKKREKSYKAMGYTLQYVGNDNNNQPTARAPNAQVAISY
FKLMAKYV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1129 NP_286664.1 helicase Not tested TAI Protein 1e-154 44
Z1568 NP_287072.1 helicase Not tested TAI Protein 1e-154 44