|
Name : istA3 (HCH_06236) Accession : YP_437307.1 Strain : Hahella chejuensis KCTC 2396 Genome accession: NC_007645 Putative virulence/resistance : Unknown Product : IS21 family transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 6367193 - 6368734 bp Length : 1542 bp Strand : - Note : Transposase and inactivated derivatives COG4584 DNA sequence : ATGCCAGCGAAGAGGTTATCCATGCGTAAAATTAAAGAAGTCCTTCGCCTCAAGTGGGAGCGCGGGCTGAGCAACCGGCA GGTTGCAGAAGCCTGCGGCATCAGCCGCCCCACCGTAAGCGAGTATCTCCGACGGGCCGCCGAAGCGGATGTTAGCTGGC CGTTGCCAGAGAATCTGAGTGGAGCCCAGTTGGAGCAGTTGCTCTTCCCGCCGCCGCCAGACCTGCCAGCACAGGCCCGG GGTATTCCGGACTGGCGGCGAATCCACGAAGAACTCCGGGGCAAGAACGTCACCCTGTTCCTGCTCTGGCAGGAGTACCG GGAAGCCAATCCGAACGGCTACCAATACAGCTGGTTCTGCGAGCACTACCGAATCTGGCGCGGCAAGCTGGACTTGGTGA TGCGCCAGGACCATCGGGCCGGTGAGAAGCTGTTTGTGGACTATGCCGGGCACACCGTGCCCGTTATTGACCGCACCACC GGTGAGATCCATGAAGCACAGGTTTTTGTGGCGGTGATGGGCGCATCCAATTACACCTATGCCGAAGCCACCTGGAGCCA GTCGTTGCCAGACTGGATTGGCTCCCACATCCGGGCCTTCGAGTTCTTGGGCGGGACGCCGGAACTGGTGGTTCCGGACA ACCTTCGCTCCGGTGTCAGCAAGGCCCACCGCTACGAACCGGATCTCAACCCAACCTATCAGGACATGGCCGCCCATTAT GGCGTCGCCATTGTCCCGACAAGGGTTCGTAAGCCCCGCGACAAGGCCAAGGTGGAAGGCGGCGTATTGATCGTCGAGCG TTGGATCCTGGCGGCCCTGCGCCACCGTCAGCACTTCTCCCTGGGGCAACTCAACGCCACCATTCGTGAGCTACTGGAGA CGCTCAACAACCGCCCCTTCCGTAAGTTGCCCGGCTGCCGGCTCGATCACTTCAAACAGCTGGACAAACCGGTTCTACAA CCGCTACCCGCAGAGCCGTATGTCTACGCTGAGTGGAGGAAAGCCCGGGTACACATCGACTACCACATCGCCATCGACGG GCATTACTACTCGGCGCCTTACACCCTGATCAAGAAAGAGGTGGAGGTCAGGATGACCCACAACACCATCGAATGCTTCT ACCGAGGCAACCGGATCGCCAGCCATCGGCGTTCGGATCAGAAGGGCCGGCATAGCACCATCGCCGCTCACATGCCAGAG TCCCATCGCCAAGCCGGTGAGTGGTCTGCGGAGCGGCTAATCGCCTGGGCGGCCAAGACCGGGCTGGCGACGGAGAAGCT TATCCGCACCGCATTGGGCGCCCGCAAACACCCACAGCAGGCTTACCGCTCCTGCCTGGGCATTCTCCGGTTGGGGCGGA GCTATGGGGAGACACGGCTCGAAGCCGCCTGCCAACGGGCGCTCACGCTGGGTAGCTACCGCTACAAGAGCATTGAGTCC ATCCTCAAGCATCGCCTGGATCAGCAACCTCTGGAAGAGCAGCAGGAGCTGGCCCTGCCCGACACCCACGACAACATCCG CGGTCCCGCCTACTACCACTAA Protein sequence : MPAKRLSMRKIKEVLRLKWERGLSNRQVAEACGISRPTVSEYLRRAAEADVSWPLPENLSGAQLEQLLFPPPPDLPAQAR GIPDWRRIHEELRGKNVTLFLLWQEYREANPNGYQYSWFCEHYRIWRGKLDLVMRQDHRAGEKLFVDYAGHTVPVIDRTT GEIHEAQVFVAVMGASNYTYAEATWSQSLPDWIGSHIRAFEFLGGTPELVVPDNLRSGVSKAHRYEPDLNPTYQDMAAHY GVAIVPTRVRKPRDKAKVEGGVLIVERWILAALRHRQHFSLGQLNATIRELLETLNNRPFRKLPGCRLDHFKQLDKPVLQ PLPAEPYVYAEWRKARVHIDYHIAIDGHYYSAPYTLIKKEVEVRMTHNTIECFYRGNRIASHRRSDQKGRHSTIAAHMPE SHRQAGEWSAERLIAWAAKTGLATEKLIRTALGARKHPQQAYRSCLGILRLGRSYGETRLEAACQRALTLGSYRYKSIES ILKHRLDQQPLEEQQELALPDTHDNIRGPAYYH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC39294.1 | hypothetical protein | Not tested | LPA | Protein | 2e-114 | 50 |
| ORF_6 | AAZ04417.1 | putative transposase subunit | Not tested | PAI I APEC-O1 | Protein | 1e-114 | 50 |
| APECO1_3528 | YP_854247.1 | transposase for ISEc12 | Not tested | PAI I APEC-O1 | Protein | 1e-114 | 50 |
| VPI2_0005c | ACA01822.1 | IstA | Not tested | VPI-2 | Protein | 3e-108 | 45 |
