Gene Information

Name : lspA (HCH_05932)
Accession : YP_437009.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 6066650 - 6067189 bp
Length : 540 bp
Strand : -
Note : lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis

DNA sequence :
ATGGATGCGCGGGCCAGTGAAGTCAGTCAAGGCGGAGGCGAAATGCAAAAAGTGAATCCAGGCATGCTGCGTTGGTTGTG
GTTGACCTTGGCTGTTATTGTCCTTGATCTGGGAACCAAGTGGTACGTGAGTACAAATATGGTTCTGGGTGAATCTGTGC
CTGTCGCGCCCTTCTTCAGCTTCACGCTGCTGCATAATACTGGCGCGGCGTTCAGTTTTCTGGCGGATGCGTCAGGGTGG
CAGCGCTGGTTCTTTATTATTCTGGCTGCTGTAGTGAGTGTGGTGTTGGTGCTTTGGCTGGTTCGCTTAACTCGTGAGGA
GCGTTGGATGGCATGCGCGCTCAGTTTGGTTCTGGGGGGGGCTTTAGGCAACCTGTACGATCGGGCTGTGTTAGGGTATG
TCGTTGACTTTTTGCACTTTTTCTATGGCGGATATAACTTTCCCGCGTTTAACTTTGCGGATACCACTATTACTATTGGC
GCATTCATGATTGCGATTGATGTATTCCGTAATCCTTCCGGTGCGACGGAAGATAAGTAA

Protein sequence :
MDARASEVSQGGGEMQKVNPGMLRWLWLTLAVIVLDLGTKWYVSTNMVLGESVPVAPFFSFTLLHNTGAAFSFLADASGW
QRWFFIILAAVVSVVLVLWLVRLTREERWMACALSLVLGGALGNLYDRAVLGYVVDFLHFFYGGYNFPAFNFADTTITIG
AFMIAIDVFRNPSGATEDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 1e-13 47
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 1e-13 47
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 2e-13 47
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 4e-14 42
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 4e-14 42
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 4e-14 42
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 6e-14 42
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 6e-14 42