Gene Information

Name : murD (HCH_05885)
Accession : YP_436959.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Unknown
Product : UDP-N-acetylmuramoylalanine--D-glutamate ligase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0771
EC number : 6.3.2.9
Position : 6005707 - 6007047 bp
Length : 1341 bp
Strand : -
Note : TIGRFAMsMatches:TIGR01087

DNA sequence :
ATGTCGATTCTGGCGCGCGACCGTAATATCGCTGTTATCGGATTAGGTAAGACCGGGCTGTCCTGCGCGGATTATCTGAC
GCGGCGCGGTTATGGTTTTTGCGTGATGGATACGCGGGAGAATCCTTCTGGACTGGCGGAGCTTAATGCGATCAATCCGG
ATGTTCCGGTTGTGACTGGCAAGTTGGATCAGGACATGCTGGCTCGCGCAGCCGAAATCTGGTTGAGCCCTGGCGTGCCA
TTGAGCCACCCGGATCTTCAGGCTGTGAAAGGGCAAGTCAAAATCTGTGGCGATGTAGACGTATTCAGCCGTGAAGCCAA
TGCGCCCATTCTGGCCATCACCGGCTCCAACGGCAAAAGCACGGTGACCACGCTGGTCGGCGAGATGGCGAAGGCGTGCG
GCGTGAATGTCGCTGTGGGTGGAAACCTGGGAACGCCTGTGCTGGATCTGCTGGCGGATGAGGTTGAGTTGTATGTGGTG
GAGCTGTCCAGCTTCCAGTTAGAGACGACTGATCGCTTGGGCGCTTTGGCGGCGACAGTGCTGAATCTGTCGGAAGACCA
TATGGATCGCTATGCGGACATGATGGCTTACCACCTCGCCAAGTTGAGAGTTTTCTATGGCTGCCGTCGCCAAGTGCTGA
ATCGCGATGATGCGTTGGCGCAACCGCCGCTAAGCCGGGAAGCGGAAATCACGTGGTTTACCTTAAAGACGCCCGAGCCT
GGACAGTATGGGGTGTTGGAGGAGAAGGACGGAGCCTGGCTGGCCTATGGCGCAGAAAAGCTGTTGCCCGTGGAGCAAAT
GCGCATTCGCGGTAAACACAACTGGAGCAACGCGCTGGCTGCGCTGGCGTTGGCGGATGCAGCAGGTTTGGAGCGCGAGC
CCTGTCTGCAGGCGTTGAGAGAGTTTACAGGGCTGACCCACCGTTGCGAGTGGGTGGCCGACAAAGACGGGGTCGCCTAC
ATCAATGACTCCAAAGCCACCAACGTGGGAGCCACACAAGCTGCATTGGCCGGATTGGGCCCTGTTACAAGCGGTGGAAT
TGTATTGATTTGCGGCGGACAAGGGAAAGGACAGGATTTCACTCCTTTGGCCCCAGCGGTGAAAGAGTGGGTGTCGACGC
TGATCATCATTGGTGAAGACGGCCCTAAATTAAAAGAAGCACTTGCGGGTGGCGTAATGGCTCTGTCTGCGGAGACCATG
GAAGAAGCGGTTAAACTGGCGGCGGAAAAATCCTCGCCCGGTGATTTGGTGCTGCTGTCGCCTGCCTGCGCCAGTTTTGA
CATGTTCAAAAACTATGAGGATCGCGGCGATCAGTTCAAACAATGGGTGAGGGCGTTATGA

Protein sequence :
MSILARDRNIAVIGLGKTGLSCADYLTRRGYGFCVMDTRENPSGLAELNAINPDVPVVTGKLDQDMLARAAEIWLSPGVP
LSHPDLQAVKGQVKICGDVDVFSREANAPILAITGSNGKSTVTTLVGEMAKACGVNVAVGGNLGTPVLDLLADEVELYVV
ELSSFQLETTDRLGALAATVLNLSEDHMDRYADMMAYHLAKLRVFYGCRRQVLNRDDALAQPPLSREAEITWFTLKTPEP
GQYGVLEEKDGAWLAYGAEKLLPVEQMRIRGKHNWSNALAALALADAAGLEREPCLQALREFTGLTHRCEWVADKDGVAY
INDSKATNVGATQAALAGLGPVTSGGIVLICGGQGKGQDFTPLAPAVKEWVSTLIIIGEDGPKLKEALAGGVMALSAETM
EEAVKLAAEKSSPGDLVLLSPACASFDMFKNYEDRGDQFKQWVRAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00311 YP_008207776.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR25 Protein 2e-89 50
BJAB0868_00315 YP_008211641.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR26 Protein 2e-89 50