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Name : fliP (HCH_05178) Accession : YP_436281.1 Strain : Hahella chejuensis KCTC 2396 Genome accession: NC_007645 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 5326453 - 5327214 bp Length : 762 bp Strand : - Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGGCGCGCAATAGGGTCCTGCGGTTAACTTACCTGATCTTGTTTTTGATGCTTCCTGGAGTCGCCTGGTCGGCTCAGGA CGCCATCCTGCCGGCGGTCAAACTGGTGACCAATCCAGACGGCACGCAGGAATACTCCGTCACCCTGCAAATTCTCGCGC TGATGACGGCGCTGACCTTTATCCCCGCTTTCCTGATGATGATGACGTCTTTCACCCGCATCATCATCGTGTTTTCCATT CTGCGTCAGGCGCTCGGCTTACAGCAGGCGCCGTCCAATCAGATTCTGGTGGGCATCGCGCTGTTCCTGACCTTCTTCAT CATGGGACCCACATTCAAGCAGGCCAACGAGGTTGCGCTGCAGCCTTACCTCGCTGAACAACTGACGGCGCAGGAAGCGG TGGCCAAAGCCAGCGAACCCTTCCGCGAATTCATGCTGCGCCAGACCCGCGAAAGCGATCTGGGATTGTTTATTCGTCTG GCGGGGGATGAGAACAAATACGCCAACCCGGAAGAAGTACCGTTTACGATCTTGATGCCGGCGTTCGTCACCAGCGAGCT GAAAACCGCTTTTCAGATCGGCTTTCTGATATTTATTCCATTCCTGATTATCGACATGGTGGTGGCCAGCGTTCTGATGG CCATGGGGATGATGATGCTATCCCCGATCATTATTTCGCTGCCGTTCAAAATCATGCTGTTCGTGCTGGTGGATGGCTGG GCCCTGATCATGGGCACCCTGGCCGCCAGTTTTGGGGTTTAG Protein sequence : MARNRVLRLTYLILFLMLPGVAWSAQDAILPAVKLVTNPDGTQEYSVTLQILALMTALTFIPAFLMMMTSFTRIIIVFSI LRQALGLQQAPSNQILVGIALFLTFFIMGPTFKQANEVALQPYLAEQLTAQEAVAKASEPFREFMLRQTRESDLGLFIRL AGDENKYANPEEVPFTILMPAFVTSELKTAFQIGFLIFIPFLIIDMVVASVLMAMGMMMLSPIIISLPFKIMLFVLVDGW ALIMGTLAASFGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 4e-18 | 42 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 4e-18 | 42 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 4e-18 | 42 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 3e-19 | 41 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 4e-27 | 41 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-24 | 41 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 9e-24 | 41 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 8e-24 | 41 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 8e-24 | 41 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 3e-23 | 41 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 1e-23 | 41 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 1e-23 | 41 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 9e-24 | 41 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 1e-23 | 41 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 9e-24 | 41 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 1e-23 | 41 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 9e-24 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_436281.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 2e-66 | 72 |
| fliP | YP_436281.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 2e-57 | 61 |
| fliP | YP_436281.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 2e-50 | 60 |
| fliP | YP_436281.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 8e-53 | 58 |
| fliP | YP_436281.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 1e-24 | 42 |
| fliP | YP_436281.1 | flagellar biosynthesis protein FliP | VFG0827 | Protein | 5e-24 | 41 |
