Gene Information

Name : HCH_04952 (HCH_04952)
Accession : YP_436066.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Resistance
Product : lysophospholipase L1 biosynthesis ABC transporter ATPase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 5085388 - 5086065 bp
Length : 678 bp
Strand : -
Note : COG4181

DNA sequence : 
ATGACTTCGGTTGATGTGCTTGAGGTTAAATCGCTTACGAAAAGTGTCTCCAATGGTAGCGGGCGTTTGGATATATTGAA
AGGCGTCGATCTGCAAATCAAGGTGGGGGAGTCGTTGGCGATTATCGGACGCTCCGGCTCCGGCAAGACCACACTGCTGA
GCATCATGGCGGGCCTTGATCTGCCGTCAGCCGGTCAGGTGCGTATGCTGGGCAAGGATCTCGCGCAACTGGATGAGGAC
GGTCGCGCCGCTATTCGCGCCCAACATGTCGGTTTCGTTTTTCAATCCTTTCAGCTCATTCCCACCATGACAGCTCTGGA
AAATGTGATGTTGCCGCTGGATCTCGCCGGCGTTGCGGAAAGTCGCGAGCGGGCGCGGGACTGGCTGGACCGAGTGGGGT
TGCTGGAGCGAGAGGGGCATTACCCGCGCCAGTTGTCCGGAGGCGAGCAACAGCGGGTCGCCGTAGCCAGAGCTTTCGCC
ACGGAGCCGGATATTCTGTTTGCGGATGAGCCTACCGGCAATCTGGATCTGGAAACCGGGCAGCACATCATGGATCTGCT
GTTTGATCTGAATAAACAGCATTCCACGACATTGATTCTGGTTACTCACGACCGTGAACTGGCAGGCCGCTGCGGTCGAT
CTCTGGCCCTGGATCAGGGCGTTCTGGAGATGGCGTAA

Protein sequence : 
MTSVDVLEVKSLTKSVSNGSGRLDILKGVDLQIKVGESLAIIGRSGSGKTTLLSIMAGLDLPSAGQVRMLGKDLAQLDED
GRAAIRAQHVGFVFQSFQLIPTMTALENVMLPLDLAGVAESRERARDWLDRVGLLEREGHYPRQLSGGEQQRVAVARAFA
TEPDILFADEPTGNLDLETGQHIMDLLFDLNKQHSTTLILVTHDRELAGRCGRSLALDQGVLEMA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-37 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-38 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_04952 YP_436066.1 lysophospholipase L1 biosynthesis ABC transporter ATPase NC_012469.1.7686878. Protein 1e-42 46
HCH_04952 YP_436066.1 lysophospholipase L1 biosynthesis ABC transporter ATPase NC_008702.1.4606598. Protein 1e-36 46