Gene Information

Name : HCH_04253 (HCH_04253)
Accession : YP_435385.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Virulence
Product : chaperone activity ATPase ATP-binding subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 4398184 - 4400943 bp
Length : 2760 bp
Strand : +
Note : COG0542

DNA sequence :
ATGATTGAGTTAAACTTACGCCAACTCATTGAACCCACCACTTCCGTCGTACGCAAATCGCTAGAGGATGGTTTGCGTCT
GGCCCAACAGGAACGTCACAGCTCACTGGAAATCGAACACGTGCTGCTGAAAGTGCTGGAGCAAAGCGACAGCGATCTGG
ACCGCGTGCTGGAACAGCTCGGCGTCGACATCGGCAAAGTCAGCAGAGAACTGAGCCAGACTGTAGGCAAATTCCACCGC
GATAACCCCCGGGATATGGTTCCCTTTTCACCATTGGTGGTGGATGCGCTAAAAGCCGGCTGGCTACTGGCGTCAGTGGA
AATGGGCGTAAATTTCATCAGCTCCGCGCACCTGTTTGCGGCGGTCATGTCGCACAACACTATGCGCAACCAATTGCTGA
GTTCAGTCAAAACCCTGCAGGAAATTTCTCTGGAGAAAGTATTGCCTGCGGTGAAAGCCGTCACCGGACAATCCTCCGAA
AGCCGCGCCTACCTGAAGGCGGCTGCGGGCGGCGGCGCTCCGGCGGCGCCGACAGCGCAAGGCGGCGCATTGCAGAAATA
TACCGTCAACCTGACCGAAAGAGCGCTGAACAACGAAATCGATCCGGTACTGGGTCGCGACCCGGAAATTCGTCAGTGCA
TCGACATCCTCACCCGTCGCCGTCAGAACAATCCCATCCTGACCGGTGAAGCCGGCGTTGGTAAGACTGCAGTCGTTGAA
GGTCTGGCGCTGCGCATCGCGCAAAAAGACGTGCCGGAGCCCCTGCAGGGCGTACATATTCATGTTCTGGACCTGGGCTT
GCTGCAAGCCGGCGCCAGTATGAAAGGCGAATTCGAACAGCGCCTGAAATCCGTGATCGAAGAGGTCAAAGCCTCTCCCG
CGCCCATCATCATGTTTATCGATGAGGCGCACACCATGATCGGCGCGGGCGGTAAAGAAGGCCAAGGTGACGCCGCCAAC
CTGCTCAAGCCTGCGCTGGCGCGCGGCGAACTGCGCACCATCGCCGCCACCACCTGGGCGGAGTACAAGAAATATTTCGA
ACGCGATCCTGCTCTGACCCGTCGCTTCCAGGTGGTCAAGGTCGAAGAACCGACAGAAGCCGTCGCAATCGACATGCTGC
GCGGCATCTCGAAAATCCTGGCGATCCACCACAACGTGCGCATCTCCGATGACGCCATTATCCAGGCGGTGAAACTGTCC
GCCCGTTATATTCCTGGTCGTCAGTTGCCGGACAAAGGCGTGAGCCTGCTCGACACAGCCTGCGCCCGCGTCTCCCTGAG
CCAAAGCGCCACGCCGTCTTTGATCGAGGACACCCGTCGTCGCATTCAACAGATCGACACTAACCTCGATCTGATTTCCC
AGGAAAATATCTCCTCCGGCGAATATCACGAGACCTTGGAACTACTCACCGAAGAGAAAGCCGTTCTGGAAGCCTCTCTC
GCCGCCCAAACCGAGCAGTGGGAAAAGGAAAAAGATCTGATCGCCAAAATCCTGGAAGTGCGCACCAAGCTGGAGCAGGA
CTACCAAGCCAAGAAAGGCCCTGAAGACGCCGGCGATCGCCTGAGCGATGAAGAAGTCGCCGAACTGCAGGTGGAGTTCA
AGAACCTGTTCGCCGCCTTGGCGTCCGCACAAGGGGATCAGCCGTTAATGATGCCTCATGTGGATGGTCAGGCTGTGGCG
GAAGTCGTCGCCAACTGGACCGGCATTCCGGTCGGCAAGATGGTGAGCGATGAGATCAATGGCATTCTTAACCTGCATGA
GCAGTTGGAAAAACGCGTTATCGGCCAGTCTCACGCCCTGGAAGCCATCGCTCAGGCTATTCGCACTTCCCGCGCCGGCC
TGACCGATCCGCGCAAACCTATCGGCGTCTTCCTGATGGTCGGCCCTTCCGGCGTAGGTAAGACCGAAACCGCGCTGGCG
TTGGCGGACACACTGTTCGGCGGCGAGCAGAATCTGACCGTTATCAACATGGCCGAGTTTAAAGAAGAGCACAAAGTCTC
CATGCTGCTGGGCTCTCCTCCCGGATATGTGGGCTATGGCGAAGGCGGCGTGTTGACGGAAGCCGCTCGCCGGAAGCCTT
ACTCGGTCATTCTGCTGGACGAAATGGAAAAAGCCCACCAAGGCGTGCAGGACGTGTTCTACAACCTGTTCGACAAGGGC
TCCATCAAAGATGGCGAAGGCCGCGACATCGACTTCAAGAACACGGTCATCATCATGACCTCCAACGCAGGCGAAGAAGC
GATTCGCGCCATCTGCGCGCAGTCTGAAGAGAAGCCGGAGCCGGATGTCATGCTCGACAGCATGCGCCACGAGCTGCTGA
AGTACTTCAAACCTGCGTTTTTGGGTCGCGCCAACGTGATTACCTATTATCCGCTGGACGACGAGAATCTGTTCAAGATC
TGTCGCATCAACATGGATCGTATTGCGCGCAGAGTACGCAATCACTACGGCGCCGCATTCACCTACGACGAAGACGTGTT
GCTCAACATCGTCGCCCGTTCGCAGGAAGTGGATACCGGCGCGCGTAATATCGAACATATACTGAACCGCACCGTGCTGC
CTGAACTGTCCACCGAATGTCTGAGCAGACTGGCGAACGGCGAACATATCGAGCACATCCACATCAGCGCTACGGAAGAA
GGTAACTTCGGTTATCTGTTCAATGCCGACGCCGCGGCTGCAGCGTCTGCGGAACCGCAGGCAGTGGTGGATACGAGTGT
TGACGCAGACGTGGATGCCGATGCGGACGCAGCCGAATAA

Protein sequence :
MIELNLRQLIEPTTSVVRKSLEDGLRLAQQERHSSLEIEHVLLKVLEQSDSDLDRVLEQLGVDIGKVSRELSQTVGKFHR
DNPRDMVPFSPLVVDALKAGWLLASVEMGVNFISSAHLFAAVMSHNTMRNQLLSSVKTLQEISLEKVLPAVKAVTGQSSE
SRAYLKAAAGGGAPAAPTAQGGALQKYTVNLTERALNNEIDPVLGRDPEIRQCIDILTRRRQNNPILTGEAGVGKTAVVE
GLALRIAQKDVPEPLQGVHIHVLDLGLLQAGASMKGEFEQRLKSVIEEVKASPAPIIMFIDEAHTMIGAGGKEGQGDAAN
LLKPALARGELRTIAATTWAEYKKYFERDPALTRRFQVVKVEEPTEAVAIDMLRGISKILAIHHNVRISDDAIIQAVKLS
ARYIPGRQLPDKGVSLLDTACARVSLSQSATPSLIEDTRRRIQQIDTNLDLISQENISSGEYHETLELLTEEKAVLEASL
AAQTEQWEKEKDLIAKILEVRTKLEQDYQAKKGPEDAGDRLSDEEVAELQVEFKNLFAALASAQGDQPLMMPHVDGQAVA
EVVANWTGIPVGKMVSDEINGILNLHEQLEKRVIGQSHALEAIAQAIRTSRAGLTDPRKPIGVFLMVGPSGVGKTETALA
LADTLFGGEQNLTVINMAEFKEEHKVSMLLGSPPGYVGYGEGGVLTEAARRKPYSVILLDEMEKAHQGVQDVFYNLFDKG
SIKDGEGRDIDFKNTVIIMTSNAGEEAIRAICAQSEEKPEPDVMLDSMRHELLKYFKPAFLGRANVITYYPLDDENLFKI
CRINMDRIARRVRNHYGAAFTYDEDVLLNIVARSQEVDTGARNIEHILNRTVLPELSTECLSRLANGEHIEHIHISATEE
GNFGYLFNADAAAAASAEPQAVVDTSVDADVDADADAAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-154 43
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 9e-134 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 7e-134 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_04253 YP_435385.1 chaperone activity ATPase ATP-binding subunit VFG2076 Protein 0.0 50
HCH_04253 YP_435385.1 chaperone activity ATPase ATP-binding subunit VFG2084 Protein 8e-153 43