Gene Information

Name : HCH_00405 (HCH_00405)
Accession : YP_431741.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 414977 - 415987 bp
Length : 1011 bp
Strand : +
Note : COG0582

DNA sequence : 
ATGGCAGTGAAGAAAGTAGCCAACGGGTGGAAAGTAGACATCCGACCAGAAGGGGTTTATGGGAAAAGAATAAGAAAAAC
TTTTCCAACCAAACGGCAAGCTGAACAGTGGCAGATAGACCAAAAGGCAAAGGCTAACGCTGGCGAGTGGAGCCCACCAA
ACAAAGACCGCCGCAAGCTCTCTGATTTAGTGAACACTTGGTATGACTTACATGGGCATACTTTAAAGGATTGCGATAAT
CGCTTGAGATCACTAACGGCCCTAGTGAATAGATTAGGAGACCCTATAGCAAAAAACTTCACTGGAGAAGACTTTCTTGA
ATACCGAAGATTTAGACTGACACAAAAGCATGAGCACAGGGATAAGCTTGTGGAGCCAAATACTGTAAATCATGAGCATG
CCTATCTCTTTGCTGTATTTAGCAAATTAATTAAGATTAAAAACTGGAAGCTTGATAATCCATTGAAAGGACTCTCAAAA
CTTACGATCGATGAGCCAGCACTTGTTTATCTGGAACAGGATGAAATAAGGGCATTGTTGGCATCCCTAAAGGAGTCAAA
AAACCCTAATGTGTTAGTGATTTCAAAGATATGTTTGTCTACAGGCGCGCGGTGGGGTGAAGCTGAATCACTTCAGGCTC
AACAAGTGAAACAAGGCAAAATCCACTTTATTAAAACTAAAAACAGTAAGTCCCGAGCTGTACCCATTTCAGACGAGCTT
TCAAAAGAAATAATAGCAGGGCGTCCTAGATTTGGCCGACTGTTCCCGGGTACATCAAAACAAGCCTTTCGCCTTGCAGT
AGAGCGCTCAGGCATCAACTTACCCGATGGTCAAATGACCCACGTACTCAGACATACGTTTGCTAGCCACTACATGATCA
ATGATGGAAACATTCTAAAGTTAAAAGATATCCTCGGGCACAAAACACTATCTATGACTATCCGTTACGCTAAGCTCGCT
CCAAAACATTTGGCAGATGCAGTAACTCGAAACCCTTTAGCCACGCTGTAG

Protein sequence : 
MAVKKVANGWKVDIRPEGVYGKRIRKTFPTKRQAEQWQIDQKAKANAGEWSPPNKDRRKLSDLVNTWYDLHGHTLKDCDN
RLRSLTALVNRLGDPIAKNFTGEDFLEYRRFRLTQKHEHRDKLVEPNTVNHEHAYLFAVFSKLIKIKNWKLDNPLKGLSK
LTIDEPALVYLEQDEIRALLASLKESKNPNVLVISKICLSTGARWGEAESLQAQQVKQGKIHFIKTKNSKSRAVPISDEL
SKEIIAGRPRFGRLFPGTSKQAFRLAVERSGINLPDGQMTHVLRHTFASHYMINDGNILKLKDILGHKTLSMTIRYAKLA
PKHLADAVTRNPLATL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4645 NP_458725.1 phage integrase Not tested SPI-7 Protein 1e-67 46
t4338 NP_807932.1 phage integrase Not tested SPI-7 Protein 1e-67 46