Gene Information

Name : HCH_00401 (HCH_00401)
Accession : YP_431737.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Unknown
Product : putative exonuclease
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0847
EC number : -
Position : 409542 - 410120 bp
Length : 579 bp
Strand : -
Note : DNA polymerase III, epsilon subunit and related 3'-5' exonuclease; COG0847

DNA sequence :
ATGAATATCGGATTAGAACTTTTTAAAGAATGGCTAACAAGCTCCCGCGTGGTGGTGTTGGACACGGAAACCACGGGGCT
GGACGATCAGGCGGAAGTGATAGAAATCAGCGTCATGGACATGCGTGGAAATGTATTGTTTGACCAGTTGGTGCGCCCGC
TTAATCCAGTGCCGCCGGAAGCCGCTGAGATTCACGGCGTTACCAACGAAAAACTGGCGAACAAGCCAAACTTTCCAGAC
GTGTATATTTCACTTTGGCGAGCGATCGGCGGTAGAACAGTGGTGGCTTACAATGCCGACTTTGACCGTCGGCTATTAAA
GCAGACCTGCGCCGCCTACAGATTGCCGATGATTGAAGCAAACTGGCAATGCGCTATGAATGCTTACGCCAGATATCGGA
AAGAGCCCGACGCGAAACGAGGCGGCTATAGAAGGCAGAGCTTAGCCAAGGCCGCCGCGCAAATGGGGATAGAAGTGTAT
GGCGCCCACCGGGCTGTGGCGGATTGCTTCACCACGGTGGAGGTGATTAGAGCCGTCGCCGCACTATCTGAGCCAGCACA
TCATAACACTAATCTATAG

Protein sequence :
MNIGLELFKEWLTSSRVVVLDTETTGLDDQAEVIEISVMDMRGNVLFDQLVRPLNPVPPEAAEIHGVTNEKLANKPNFPD
VYISLWRAIGGRTVVAYNADFDRRLLKQTCAAYRLPMIEANWQCAMNAYARYRKEPDAKRGGYRRQSLAKAAAQMGIEVY
GAHRAVADCFTTVEVIRAVAALSEPAHHNTNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4637 NP_458717.1 putative exonuclease Not tested SPI-7 Protein 1e-23 43
t4330 NP_807924.1 exonuclease Not tested SPI-7 Protein 1e-23 43