Gene Information

Name : fliP (HCH_04067)
Accession : YP_435205.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 4221300 - 4222031 bp
Length : 732 bp
Strand : -
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence : 
TTGCCTTTATTGGGATTACTTTTATTTCCATCATTGAGCTGGGCGGACGCGTCTACGGCTTCATTTGGCGTTGACTTATC
CGGACTGGATAAGTCATCTCCTGATGAAGTCGCCAGCGCGCTTCAAGTCTTAGCGGTTTTGACCGTACTAAGTTTGGCCC
CAGCATTGTTAATCGCCCTGACGTCGTTTACTCGCATAGTCATTGTGCTTTCCATGCTGCGATATGCGTTTGGTATGCAA
CAAACGCCGCCTAATACCGTGATTATTGCGCTTTCTCTATTTTTGACTCTTTTTACGATGGCGCCTGTGTTCAATAAGAT
TGACCAGCAGGCGGTGCAGCCTTATTTGGCTGGAGAGCTTGTTTTTACGGAAGCCGTGAACGCGGGGTTGGCGCCGATGC
GGGAGTTTATGGTCAGGCAAACCAGGGAGAAAGACCTCGCTCTTGCCATTGAAATGGCCGGAGAAGAGTCGCCGGAAACA
TTAAACGATATCTCCAATACGTCGCTTATAACGGCGTTTATGCTCAGCGAACTGCAAACGGCTTTTCAAATTGGATTTGT
CATTTTCCTGCCGTTTTTATTGATTGATCTGGTTTCAGCCAGTGTGCTGATGTCAATGGGGATGATAATGGTGCCGCCAT
TGACAATATCGCTACCCGTTAAAATTCTAATGTTTGTGCTTATTGAAGGTTGGACTCTGGTGGCTCAGGCATTAGTTGGA
AGTTTTAATTAA

Protein sequence : 
MPLLGLLLFPSLSWADASTASFGVDLSGLDKSSPDEVASALQVLAVLTVLSLAPALLIALTSFTRIVIVLSMLRYAFGMQ
QTPPNTVIIALSLFLTLFTMAPVFNKIDQQAVQPYLAGELVFTEAVNAGLAPMREFMVRQTREKDLALAIEMAGEESPET
LNDISNTSLITAFMLSELQTAFQIGFVIFLPFLLIDLVSASVLMSMGMIMVPPLTISLPVKILMFVLIEGWTLVAQALVG
SFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAB06005.2 HrcR Virulence Hrp PAI Protein 3e-31 43
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 2e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_435205.1 flagellar biosynthesis protein FliP VFG2338 Protein 6e-44 51
fliP YP_435205.1 flagellar biosynthesis protein FliP VFG1259 Protein 1e-50 50
fliP YP_435205.1 flagellar biosynthesis protein FliP VFG2494 Protein 6e-46 50
fliP YP_435205.1 flagellar biosynthesis protein FliP VFG2016 Protein 6e-54 49
fliP YP_435205.1 flagellar biosynthesis protein FliP VFG0394 Protein 3e-30 41
fliP YP_435205.1 flagellar biosynthesis protein FliP VFG0188 Protein 7e-31 41