Gene Information

Name : HCH_04041 (HCH_04041)
Accession : YP_435181.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 4187167 - 4187826 bp
Length : 660 bp
Strand : +
Note : COG2197

DNA sequence : 
TTGATCAGGGTGTTAATTGTTGATGACCACGAGCTGGTGCGCGCCGGCTTGTCCAGAATGTTAAAAGATGAAGACGGTAT
TGAAGTAGTCGCAGAAGCCCGGTCGGGTGAGGAAGCAGTCAGTATTGTCCGCCAGCATCCAATCGATATTATTCTCATGG
ATATTCGTATGCCCGGCATTGGCGGGCTGGAAGCCATGCGTCGCATTCATCGTATCGATGAGAGCGTCAAAGTGGTGGCG
GTGACCGCCTGTGAAGACGACCCATTTCCTTCACGGGTCATGAAAGCCGGCGCTTCCGCCTATATCACCAAGGGCGCGGA
CATCACCGAGATGGTCAAAGCCATCCGCGTGGTGCACGCCGGGCAACGCTACATCAGCCCGGACATTGCGCAGAAAATGG
CGTTGCGCCCGTTTGACGCGGAGGAAGGCGATGTATTTGAGAGCTTGTCCGAACGGGAGATGCAAATCGCCATGATGATC
GTGAATTGCCACAAGGTGCAGGAGATTTCCGACAAGCTCTGCCTGAGCCCGAAAACGGTCAACAGCTACCGCTATCGTAT
TTTCGAGAAACTGAACATCAACAGTGACGTTGAACTCACCCTTCTCGCCATTCGGCATGGTATGCTCGACGCCAATCAGG
TCGGCAGCCTGAAAACCTGA

Protein sequence : 
MIRVLIVDDHELVRAGLSRMLKDEDGIEVVAEARSGEEAVSIVRQHPIDIILMDIRMPGIGGLEAMRRIHRIDESVKVVA
VTACEDDPFPSRVMKAGASAYITKGADITEMVKAIRVVHAGQRYISPDIAQKMALRPFDAEEGDVFESLSEREMQIAMMI
VNCHKVQEISDKLCLSPKTVNSYRYRIFEKLNINSDVELTLLAIRHGMLDANQVGSLKT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 1e-56 56
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 1e-56 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_04041 YP_435181.1 response regulator VFG1889 Protein 4e-53 50