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Name : gspE (HCH_03937) Accession : YP_435082.1 Strain : Hahella chejuensis KCTC 2396 Genome accession: NC_007645 Putative virulence/resistance : Virulence Product : type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 4077864 - 4079420 bp Length : 1557 bp Strand : - Note : COG2804 DNA sequence : ATGGACGAGCGCCAACTCGAAGCAACTGAAGACGCGATCCCAGTATTGACGGACGATTCCGAAGATCAGGAGGATCAGCC GCGGTCCTATTACCGCTTGCCGTTTTCATTCGCCAAGCGTCACGGCGTGTTTGTCGGTCAACCTGATCAGGATCATGGTC AAATTGTCTATTACAAAGAGTCGTTGAAGCCGCATATATTTGCGGAAGTAAATCGATATGTAGAAGGCAAATGCCGCTTT GAAGTCATTGAAGACGGCGTCTTTGAAGATGGGCTTGCGAAGGCGTATCAGAATGACTCTACTGAAGCCATGCAAATGGT GGAAGGCTTGGGTGACGATATGGACCTGGCCAGTCTGGCGGATTCCGTTCCGGAAACGGAAGATCTGCTGGAACAGGAAG ACGACGCGCCCATCATTCGTCTGATCAACGCTATTCTGACGGAAGCGGTTAAAACCAACGCTTCGGATATTCATATAGAA ACCTTTGAAAAAGACCTTGTCGTGCGCTTCCGCGTGGATGGCGTATTGCGAGAGATGGTCAAACCCAAGCGCGCGCTGGC GCCGCTGCTGGTGTCCCGTATCAAGGTTATGTCCAGACTGGATATCGCAGAAAAAAGAGTTCCACAGGACGGCCGGATTT CCCTGCGCGTAGCAGGTAAAGAAGTGGATATCCGGGTGTCCACCATGCCTTCCGCCAACGGCGAACGTATCGTACTGCGT TTGCTGGATAAACAGGCGGGCAGACTGAAACTTGAAAAGCTTGGCATGGCCGATCGTGACTTCAAGCTGATCAAGAAACT GATTCATCGTCCCCACGGCATTATTCTGGTGACGGGGCCTACCGGTTCCGGTAAAACCACCAGCTTGTACGCAGGCCTTT CTGAAATTAACGACCGCAGCCGCAATATTTTAACGGTCGAAGATCCTATCGAATACAACTTGCCTGGCATCGGCCAGACT CAGGTCAACACCAAAGTCGATATGACCTTTGCCCGCGGTCTGCGCGCTATTCTGCGTCAGGACCCGGACGTGGTGATGAT CGGTGAGATCCGCGACTTGGAAACGGCCGAAATCGCCGTGCAGGCGAGTTTGACGGGTCACTTGGTATTATCCACCCTTC ACACCAACAGCGCGGTGGGCGCTGTAACCCGTTTGATGGATATGGGCGTGGAGCCTTTTTTGATATCTTCCAGTTTGATC GGGGTTATAGCTCAGCGTCTGGTGCGCGTATTGTGCGACCAGTGTAAGGAAGCCTACACGCCGGACGACGAAGTATGCGA GTTCCTCGGCATCGATCCGCACAACCCCCAGCAAATCTATCATGCGAAAGGCTGTGCAGACTGTAACCATCTTGGTTATC GGGGGCGGTTGGGTATTTACGAAGTTATTGAGGTTGATGAAGAGCTTCGTCATCTGGTGCATAAGCAAGCCGGCGAAATG GAACTGGAAGCCAGCGCTCGCAAGCGGGGCCCGAGCATTCATGCGGACGGCATAGCTAAAGTATTGAAAGGCCTGACCTC TGTGGAAGAGGTCGTGCGGGTAACTCACCGGGAGTAA Protein sequence : MDERQLEATEDAIPVLTDDSEDQEDQPRSYYRLPFSFAKRHGVFVGQPDQDHGQIVYYKESLKPHIFAEVNRYVEGKCRF EVIEDGVFEDGLAKAYQNDSTEAMQMVEGLGDDMDLASLADSVPETEDLLEQEDDAPIIRLINAILTEAVKTNASDIHIE TFEKDLVVRFRVDGVLREMVKPKRALAPLLVSRIKVMSRLDIAEKRVPQDGRISLRVAGKEVDIRVSTMPSANGERIVLR LLDKQAGRLKLEKLGMADRDFKLIKKLIHRPHGIILVTGPTGSGKTTSLYAGLSEINDRSRNILTVEDPIEYNLPGIGQT QVNTKVDMTFARGLRAILRQDPDVVMIGEIRDLETAEIAVQASLTGHLVLSTLHTNSAVGAVTRLMDMGVEPFLISSSLI GVIAQRLVRVLCDQCKEAYTPDDEVCEFLGIDPHNPQQIYHAKGCADCNHLGYRGRLGIYEVIEVDEELRHLVHKQAGEM ELEASARKRGPSIHADGIAKVLKGLTSVEEVVRVTHRE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-143 | 62 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-143 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_435082.1 | type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB | VFG0182 | Protein | 4e-160 | 67 |
| gspE | YP_435082.1 | type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB | VFG2048 | Protein | 2e-143 | 61 |
| gspE | YP_435082.1 | type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB | VFG1876 | Protein | 2e-140 | 58 |
| gspE | YP_435082.1 | type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB | VFG2426 | Protein | 4e-77 | 48 |
| gspE | YP_435082.1 | type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB | VFG0233 | Protein | 8e-86 | 48 |
| gspE | YP_435082.1 | type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB | VFG0112 | Protein | 1e-86 | 44 |
