Gene Information

Name : HCH_03795 (HCH_03795)
Accession : YP_434951.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Virulence
Product : cobalamin/Fe3+-siderophores ABC transporter ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3929110 - 3929994 bp
Length : 885 bp
Strand : +
Note : COG1120

DNA sequence : 
ATGACGCGACAGCCCTCCCCTTTACATATCGAGCCTCCTGCACCCCGTGCGCCACGCTTGCAGGCGCAGGGATTGACGGT
GGGGTATGAGCGGCGCGTTATCAGCACGAACCTCAGCGTGGCTATTCCGGACGGGTCGTTCACAGTGATCGTCGGTCCCA
ATGGATGCGGCAAGTCCACGTTACTGCGCAGTCTATGCCGGTTGCTGAAGCCCGTTTCCGGAGAAGTGCTGCTTGACGGC
CAGGACATCCATCGCTATCCCGCCAAACTGGTCGCGCGTCAGCTGGGGCTGCTGCCGCAAAGCGCCAACACGCCGGAAGG
CATCCGCGTTCGGGATCTGGTGGCGCGGGGTCGCTATCCGCATCAAAGCGCCTTTCGCCGCTGGAGCCGGGAAGATGAAA
GCGCCGTAAACGAAGCCATGATCAATACCGGCGTCGAAGACCTCGCCGACCGCATGGTGGATGAGCTTTCCGGCGGCCAG
CGCCAGCGCGTCTGGGTGGCCATGGCCCTGGCCCAACAAACCTCTCTCCTGCTGCTGGACGAACCCACCACTTATCTGGA
TATCACCCATCAGATCGAATTACTGGAGTTGTTCCGCACTCTGAACCGCAGAGACAACCGCACCCTCATCGCGGTGCTGC
ACGATCTTAACCACGCCTGCCGCTACGCCACTCATCTCATCGCCATGCGCGACGGGGCCATCATCGCTGAAGGCCCGCCC
GCAACCATCATTTCCGAGACGCTGGTGCAGGAGGTATTTGGGTTATCCAGTCTGATTATCGAAGACCCGGTGAGCCATAC
GCCGCTGGTGATACCGCGAGGCAAAGGAACTATGCAGGCACTGACGATTGCAGCAGATGCGAGAGATAGCTCTGTTTGCG
GATGA

Protein sequence : 
MTRQPSPLHIEPPAPRAPRLQAQGLTVGYERRVISTNLSVAIPDGSFTVIVGPNGCGKSTLLRSLCRLLKPVSGEVLLDG
QDIHRYPAKLVARQLGLLPQSANTPEGIRVRDLVARGRYPHQSAFRRWSREDESAVNEAMINTGVEDLADRMVDELSGGQ
RQRVWVAMALAQQTSLLLLDEPTTYLDITHQIELLELFRTLNRRDNRTLIAVLHDLNHACRYATHLIAMRDGAIIAEGPP
ATIISETLVQEVFGLSSLIIEDPVSHTPLVIPRGKGTMQALTIAADARDSSVCG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-62 52
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-68 51
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-68 51
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-65 49
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-65 49
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-65 49
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-65 49
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-50 47
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-54 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-54 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-54 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-54 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-53 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_03795 YP_434951.1 cobalamin/Fe3+-siderophores ABC transporter ATPase BAC0164 Protein 2e-50 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_03795 YP_434951.1 cobalamin/Fe3+-siderophores ABC transporter ATPase VFG0925 Protein 2e-80 59
HCH_03795 YP_434951.1 cobalamin/Fe3+-siderophores ABC transporter ATPase VFG1042 Protein 1e-50 47