Gene Information

Name : cadR (HCH_03681)
Accession : YP_434846.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Resistance
Product : Cd(II)/Pb(II)-responsive transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 3824466 - 3824903 bp
Length : 438 bp
Strand : -
Note : TIGRFAMsMatches:TIGR02047

DNA sequence : 
ATGCGAATCAGCGTGTTGGCGAAAGCGACGAACTGCGATGCGGAAACCGTCCGTTATTACGAAAAAATAGGCCTGCTGCC
GGCGCCGCCGCGCAGCGCCTCTGGTTATCGTGAATACGGGCGTAGTCATTTGGAGCGCTTGAACTTCATTCGCCATTGCC
GCTCTTTGGACATGTCCCTCAACGAAATCAAATCTCTGTTGTATTTTCGCGATCACCCCTCTCTGGACTGCGGCGAGGTC
AATGATCTGGTGGATTCCCATCTGCTGGCGCTGGAGCAGAAAATTTCCGACCTGGAGAAACTCAGGGAGCAGCTGCAATC
CCTGCGCGATAAGTGCCGCATTCACAATCGCGCTTCCGAGTGCGGCATTCTGACAGGATTGAATCACGATCCGGCAGAAG
GCGAGTGCCCTTGTCACGGGGAAACGCCCCATTCCTGA

Protein sequence : 
MRISVLAKATNCDAETVRYYEKIGLLPAPPRSASGYREYGRSHLERLNFIRHCRSLDMSLNEIKSLLYFRDHPSLDCGEV
NDLVDSHLLALEQKISDLEKLREQLQSLRDKCRIHNRASECGILTGLNHDPAEGECPCHGETPHS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 2e-29 48
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 1e-27 44
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 1e-27 44
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 8e-28 44
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 8e-28 44
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 8e-28 44
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 8e-28 44
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 1e-27 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadR YP_434846.1 Cd(II)/Pb(II)-responsive transcriptional regulator BAC0301 Protein 2e-27 51
cadR YP_434846.1 Cd(II)/Pb(II)-responsive transcriptional regulator BAC0058 Protein 7e-32 50