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Name : HCH_03627 (HCH_03627) Accession : YP_434792.1 Strain : Hahella chejuensis KCTC 2396 Genome accession: NC_007645 Putative virulence/resistance : Unknown Product : SNF2 family DNA/RNA helicase Function : - COG functional category : K : Transcription COG ID : COG0553 EC number : - Position : 3767004 - 3770015 bp Length : 3012 bp Strand : + Note : COG0553 DNA sequence : ATGAGTATACGAGACTTAATTAATAGGCTTACCAACTCCAGTCATGACATCGATATCTCCTGGAAAGTAGATCCAGTTGA AGGGCTGGATTTCATTTTTAGACCCGAAGCACTCGCTGATATTGAAAGTCGCGCTATCAACAACCCAATGTTTGGCATCC AATACGCCTATCTTAAAGGACTGCATGAAGAAGGAGTGGCAAGGAATAATGCTAACGGATATACGATTCCAGCACATTTT GTCGCGGAGCTTGATGATGACTTCTGTGAATTATTTCAATTGCCGCGCCCTTACCCAGGTCTGTATCGATGCAGAATAAA AGGAAATACCGGGCAGGCCGCATTCCATGTATCTATGGATGCCGAGCTTCCTGATGGCTGCGTTATAAACGATATTGCAC TGTTTGGCCCATTTTTGAAATTTACTGACGAAGAACTCTACCGGCTATCACCTCCAGAATGGCAAGCCTTAAATGCTCTA AAAAGGCATATTGATTTACCTGCGGATAGTAAAAACGAATACGAAAATAACTGGCTTATATTTCAGCTGCAGTTAGCAAA AAAAGCTGGCGTTCCGCTTAATTTAGCGCACTTCAATAAGTTAGAGATCTCACTTCCAACTTCCATTGGTATTGCTGTAG ATGAGCTTCCTAACGGGGACTTATCCCTAACACCAACATTCGGGGCGGACATCGCTATAGACGATATCAAGACCCGCTTG GACCAGCTACCAACGAACGGCGATCACTGTATATTGCGAATCAAAAATAGGTTTGTATTACTAGATAGCAAAAGACTTGA AGCCGCCCGTGAAATTCTAACAAGCAGGCATATTCCGAAAGAGCAAGTCGCCACATTTCTAAGATCCCCGACAGCTTACC TTAATGCAGCCCTTATCGACCTGGATACTGGCTTTTCATTACGCGTGCATGGCGCAGAGAAGTTTTCTCACCGTTACTTC GGTGATGTTGAGAAGTCTGGTATTGATTGGTTTGCCGTAGATAAATCAATACCAGAACCATTTGAAAGGATAAAAGACCT GGTAGTCTCTGAGGACAATTTAGCAGAGCTTAATGAACTCATCTCAGATGCAAAAAATGGTGGCGCAGAGCTCATTGAGT ACGCCGATAAAAAATTTGATATATCAGATACAGAAAATGTCAGTCAGACAATAGATCGCATACGAGAAGCCCTAGCCAGC AGCGATTTGGATAAAGCTCCTCCCGCACTGACAGATGAAAAAGAATCAGATACAACGATAAAAGAGCAAGCCGTTGTATC AATTGACAGCAACGATGAAAAAGAAGAGTTTGTAAGCAATATTCCTCTTGGCGGCATCAACGCAACGATCCAGAGCTTCG CAACCGACAACTTGAAGCGCTCTCCTTATCCACATCAAAGTGAAGGCATTAAATGGCTACTTGCTCATATGGATATTGCC ATAGAGCATGATGCGCCTAAAGGAGCTTTGCTGGCTGATGACATGGGCCTAGGTAAGACTTATATGGCTCTAGTTGCTAT TTCAGAATGGCTTCGACGCCAAAAGCCTGAAGGGAAGTACGATAAGCCGGTGTTGATCGTAGCGCCATTGAGCCTCTTGG AAAACTGGCAGGCGGAGGTAAATGAAACCTTCATAAAATCACCATTTAGTGACATCGTTATACTTCAATCTGGGAGCGAG TTATCGCGCTTTAAGATAAAAGGAGCTAGTCGCGAGACACAGCAAGTATTCGAAGACAAAGACATTATTGAAGACTATGA ACAGATTCGTTATTCCCTAAAAGTGGGAGGACTATACGGATCAGATCGCCTGGACATGCCTCGTCGCCTTGTTCTTACGA CTTACCAAACACTGCGTGACTATCAGTTTTCATTGAGCAGAGTAGACTGGAGCGCAATTGTCTTTGACGAAGCTCAAAAC ATAAAAAACCCAAATGCTCTGGCTACTAGGGCTGCCAAAGGACTAAAGGCGGATTTTAAACTATTAGCTACTGGCACTCC GGTGGAAAATACTTTGAAGGACTTTTGGTGCCTTATGGACACCGCAGTTCCAGGGTTATTGGGGGCATGGCAGACTTTTC GGGAAGAATATATAAGCCCAATCACCTCCGCAGATCCGGATAGCATAAACAATGAGAAATTGAGAATTGGCAAAGCGCTC CGAGATAGAGTTGGCGACTTTATGTTGCGTAGAACAAAAGAAGAAAAACTGCCTGGAATGCCAGAGAAAACCATCTACTC TGGAGACCCAAACGACCTCACGGATAGCTACCTCCCTACATTAAGCGGCATGATGAGCGGCGCTCAACTTAAGTATTACG ACGAGGTAATTGCCAGCGTACATGGCAGAAAAATTGAAGATAAAAGAAGGATAGTTCTACCTAGCTTACTGAAACTTAAA ATAGCATGTATTCATCATGATATTGGCTCAGGCTACACTCCATCAAATTCACCTAAAGAGTTTCTGAGACATGCAGAAAA CTCTATAAAAATACAAGCAATGCTAGATGTCCTAAAAGACATAGAGAAGCGGCAAGAGAAGGTGCTAGTTTTCGCCACTT CGAAAGCCGTACAGGCTTATACCAGTGCATTAATTACAACTTTGTTCAAGATTCAAGCGCCAATCGTCAACGGTGATACC AAAGCCGTAGCAACACCCAAAGATGACCTGACCAGAAAGGCTATCATAGACCGCTTTCAATCAGAGAAAGGATTCCGTGT CTTAATTATGTCTCCAATCGCAGCAGGCGTTGGGTTGACTGTAGTAGGGGCCAACAATGTAATCCACCTTGAGCGTCACT GGAATCCCGCCAAGGAAGCCCAAGCAACTGATCGCGTATATAGAATTGGCCAAAAAAAGAACGTTAATGTTTACCTGCCT ATGGCGCTTCACCCAAACTTAAGTTCATTCGACATTCAGCTTAATACCCTGTTAAACAATAAGGTTACTCTAAGCGACGC AGTTGTTGCGCCAACTAGCGTTCAACCAGAAGACTTTTCAATTTTTAAATAA Protein sequence : MSIRDLINRLTNSSHDIDISWKVDPVEGLDFIFRPEALADIESRAINNPMFGIQYAYLKGLHEEGVARNNANGYTIPAHF VAELDDDFCELFQLPRPYPGLYRCRIKGNTGQAAFHVSMDAELPDGCVINDIALFGPFLKFTDEELYRLSPPEWQALNAL KRHIDLPADSKNEYENNWLIFQLQLAKKAGVPLNLAHFNKLEISLPTSIGIAVDELPNGDLSLTPTFGADIAIDDIKTRL DQLPTNGDHCILRIKNRFVLLDSKRLEAAREILTSRHIPKEQVATFLRSPTAYLNAALIDLDTGFSLRVHGAEKFSHRYF GDVEKSGIDWFAVDKSIPEPFERIKDLVVSEDNLAELNELISDAKNGGAELIEYADKKFDISDTENVSQTIDRIREALAS SDLDKAPPALTDEKESDTTIKEQAVVSIDSNDEKEEFVSNIPLGGINATIQSFATDNLKRSPYPHQSEGIKWLLAHMDIA IEHDAPKGALLADDMGLGKTYMALVAISEWLRRQKPEGKYDKPVLIVAPLSLLENWQAEVNETFIKSPFSDIVILQSGSE LSRFKIKGASRETQQVFEDKDIIEDYEQIRYSLKVGGLYGSDRLDMPRRLVLTTYQTLRDYQFSLSRVDWSAIVFDEAQN IKNPNALATRAAKGLKADFKLLATGTPVENTLKDFWCLMDTAVPGLLGAWQTFREEYISPITSADPDSINNEKLRIGKAL RDRVGDFMLRRTKEEKLPGMPEKTIYSGDPNDLTDSYLPTLSGMMSGAQLKYYDEVIASVHGRKIEDKRRIVLPSLLKLK IACIHHDIGSGYTPSNSPKEFLRHAENSIKIQAMLDVLKDIEKRQEKVLVFATSKAVQAYTSALITTLFKIQAPIVNGDT KAVATPKDDLTRKAIIDRFQSEKGFRVLIMSPIAAGVGLTVVGANNVIHLERHWNPAKEAQATDRVYRIGQKKNVNVYLP MALHPNLSSFDIQLNTLLNNKVTLSDAVVAPTSVQPEDFSIFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VPI2_0006c | ACA01823.1 | hypothetical protein | Not tested | VPI-2 | Protein | 0.0 | 42 |
| VC0395_A1359 | YP_001217302.1 | hypothetical protein | Not tested | VPI-2 | Protein | 0.0 | 42 |
