|
Name : HCH_03262 (HCH_03262) Accession : YP_434446.1 Strain : Hahella chejuensis KCTC 2396 Genome accession: NC_007645 Putative virulence/resistance : Virulence Product : type III secretory pathway subunit EscS Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4794 EC number : - Position : 3358811 - 3359080 bp Length : 270 bp Strand : - Note : COG4794 DNA sequence : ATGACCGAAGCCGACGTTATTCAATACACCACGGAAGCGCTGCTGCTGGTGCTGATTCTTTCCATGCCGCCGATCCTGGT AGCGACCTTTACCGGCGTGCTGGTAAGCCTGCTGCAGGCGGTGACGCAGATCCAGGAGCAGACCCTGGGGTTCGCCGTGA AACTGGTGGCCATCGTCGCCACCCTTTACCTGACCGCGCGCTGGCTCGGCATGGAGATGTACCAGTACACGGTGCTGGTA TTCGACGCGATTCCCGATGTGGCCGGTTGA Protein sequence : MTEADVIQYTTEALLLVLILSMPPILVATFTGVLVSLLQAVTQIQEQTLGFAVKLVAIVATLYLTARWLGMEMYQYTVLV FDAIPDVAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscS | AAO18039.1 | LscS | Virulence | TTSS locus | Protein | 2e-20 | 56 |
| hrcS | ABA47280.1 | HrcS | Virulence | S-PAI | Protein | 2e-13 | 52 |
| hrcS | AAB06006.1 | HrcS | Virulence | Hrp PAI | Protein | 3e-15 | 50 |
| hrcS | AAT96263.1 | HrcS | Virulence | S-PAI | Protein | 4e-13 | 50 |
| hrcS | AAT96304.1 | HrcS | Virulence | S-PAI | Protein | 4e-13 | 50 |
| hrcS | AAT96344.1 | HrcS | Virulence | S-PAI | Protein | 4e-13 | 50 |
| ssaS | NP_456108.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 6e-08 | 49 |
| ssaS | NP_805091.1 | type III secretion protein | Virulence | SPI-2 | Protein | 6e-08 | 49 |
| ssaS | YP_216428.1 | secretion system apparatus protein SsaS | Virulence | SPI-2 | Protein | 6e-08 | 49 |
| ssaS | NP_460385.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 6e-08 | 49 |
| ssaS | CAA68200.1 | secretion system apparatus, SsaS | Virulence | SPI-2 | Protein | 4e-08 | 49 |
| spaQ | NP_806492.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 9e-09 | 49 |
| spaQ | NP_461810.1 | needle complex export protein | Virulence | SPI-1 | Protein | 9e-09 | 49 |
| spaQ | YP_217808.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 9e-09 | 49 |
| spaQ | NP_457283.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 9e-09 | 49 |
| hrcS | AAG33885.1 | HrcS | Virulence | Hrp PAI | Protein | 3e-13 | 48 |
| hrcS | AAT96147.1 | HrcS | Virulence | T-PAI | Protein | 4e-13 | 48 |
| hrcS | NP_791221.1 | type III secretion protein HrcS | Virulence | Hrp PAI | Protein | 5e-13 | 48 |
| hrcS | AAT96201.1 | HrcS | Virulence | T-PAI | Protein | 4e-13 | 48 |
| hrcS | ABQ88360.1 | HrcS | Virulence | Hrp PAI | Protein | 1e-10 | 47 |
| hrpO | AAB05076.1 | HrpO | Virulence | Hrp PAI | Protein | 1e-10 | 47 |
| epaQ | AAZ31292.1 | EpaQ | Virulence | ETT2 | Protein | 7e-12 | 47 |
| ECs3724 | NP_311751.1 | EpaQ | Not tested | LIM | Protein | 1e-11 | 47 |
| ysaS | AAS66847.1 | YsaS | Not tested | SSR-1 | Protein | 2e-07 | 45 |
| spaQ | AAS66866.1 | SpaQ | Not tested | SSR-2 | Protein | 2e-09 | 45 |
| hrcS | YP_198719.1 | hypothetical protein | Virulence | Hrp PAI | Protein | 2e-07 | 41 |
| hrcS | BAB07863.1 | HrcS | Virulence | Hrp PAI | Protein | 1e-07 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HCH_03262 | YP_434446.1 | type III secretory pathway subunit EscS | VFG0043 | Protein | 9e-18 | 56 |
| HCH_03262 | YP_434446.1 | type III secretory pathway subunit EscS | VFG0395 | Protein | 8e-21 | 55 |
| HCH_03262 | YP_434446.1 | type III secretory pathway subunit EscS | VFG0187 | Protein | 3e-14 | 53 |
| HCH_03262 | YP_434446.1 | type III secretory pathway subunit EscS | VFG0520 | Protein | 2e-08 | 49 |
| HCH_03262 | YP_434446.1 | type III secretory pathway subunit EscS | VFG0550 | Protein | 2e-09 | 49 |
| HCH_03262 | YP_434446.1 | type III secretory pathway subunit EscS | VFG2132 | Protein | 2e-12 | 44 |
| HCH_03262 | YP_434446.1 | type III secretory pathway subunit EscS | VFG1013 | Protein | 9e-08 | 44 |
| HCH_03262 | YP_434446.1 | type III secretory pathway subunit EscS | VFG1772 | Protein | 1e-11 | 42 |
