Gene Information

Name : HCH_03261 (HCH_03261)
Accession : YP_434445.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Virulence
Product : type III secretory pathway subunit EscT
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 3357989 - 3358774 bp
Length : 786 bp
Strand : -
Note : COG4791

DNA sequence : 
ATGAATATCGAACTAATCTCCCACACGTTGTTTGTGTTCTTTATGTCGTCCGCGCGCATGCTGGCGATGTTTATGATGCT
GCCGTTTCTGTCCAAACAGTCTTTGGGCGGCGCGATGATCCGCAACGGTGTGGCCGCCAGTTTTTCCCTCATCACCTATC
CCCTTGTCGAACATGGTCTGGACGCCCAGACTTTGGACGGGCTGCATCTGCTGCTGATTATCGTTAAAGAAGTCGGCATT
GGTCTGGCGATGGGATTTGTACTGGTGATGCCGTTCTGGGCTATCGAATCGGTGGGCTTTTTCATTGATAACCAGCGCGG
CGCAACGATGGCGAGCGCGCTAAACCCGTTGTCCGGATCGCAAACCTCTCCGTTGGGGATTCTGCTGACGCAATCGTTGG
TCACCCTTTTCTTTATCAGTGGGACGTTTCTGCTGATGCTCTATGCGCTGTACAAGAGCTATTCAGTCTGGCCGGTGTTT
GAGTTCCTCCCGTCTTTCCCCGTTTCCGGTCCGGCGTTTTTCCTGGCGCAGCTGGATACGATGATGCGCCTCACAGTGCT
GCTGGGCGCGCCGGTGGTGATCGTGATGTTTCTGACCGAGTTTGGTCTGGCGTTGATCAGCCGCTTCGCCCCGCAACTGA
ACGTATTCATTCTGGCGATGCCCTTGAAAAGCGCGGTGGGACTGGCGCTGCTGTGCGTCTACGCAGGCTTTGTAATCCGT
TATTTCAGCGAGCTGCTGGCGGATATCGACGGTCTGCTGCAACCGCTGTTTAACCTCTTGTCTTGA

Protein sequence : 
MNIELISHTLFVFFMSSARMLAMFMMLPFLSKQSLGGAMIRNGVAASFSLITYPLVEHGLDAQTLDGLHLLLIIVKEVGI
GLAMGFVLVMPFWAIESVGFFIDNQRGATMASALNPLSGSQTSPLGILLTQSLVTLFFISGTFLLMLYALYKSYSVWPVF
EFLPSFPVSGPAFFLAQLDTMMRLTVLLGAPVVIVMFLTEFGLALISRFAPQLNVFILAMPLKSAVGLALLCVYAGFVIR
YFSELLADIDGLLQPLFNLLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscT AAO18038.1 LscT Virulence TTSS locus Protein 3e-41 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_03261 YP_434445.1 type III secretory pathway subunit EscT VFG0186 Protein 1e-44 55
HCH_03261 YP_434445.1 type III secretory pathway subunit EscT VFG0396 Protein 8e-46 54