Name : HCH_03247 (HCH_03247) Accession : YP_434432.1 Strain : Hahella chejuensis KCTC 2396 Genome accession: NC_007645 Putative virulence/resistance : Virulence Product : type III secretory pathway, lipoprotein EscJ Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 3343815 - 3344612 bp Length : 798 bp Strand : + Note : COG4669 DNA sequence : ATGAAAAACACATCCACCCCATACCGATTCTTTCGTCGAACGCGGCTCTTGCTGGGCTTTCTGTTCGTGTTCATCTTGAG CGGTTGTAAAGAGACGCTGTACAGCGATCTGACTGAGAAAGAAGGCGCGGAGATGCTGTCGATTCTGCTGGAGGAGGGCC TGGAGGCGGAAAAAGTCCCAGGCCAGAAAGGGCAGACTGTTGCTCTTAGCGTTGAGCGCGCGCAGTTGTCCCAGGCGATT CGCCTGCTAAAAAGCCGGGGCTATCCCCGCGATGACTTCACCAGCGTCGGCGAGCTGTTCAAGAAAGACGGCCTGATCTC ATCGCCCCTGGAAGAGCGGGCGCGCTACATATACGGGCTGTCTCAGGAGATCGCCGCGACCCTGTCGCAACTGGACGGGG TGATTACCGCCCGCGTACATGTGGTCATGCCGGAGGTGGAGAACAAAAAAGCGCCGTTGAAGGTGTCCTCCGCCTCGGTG TTCATCAAGTATGAAAGCACCGTCAATCTGGACGACTTCGTGCCGCAGATTAAGTTGCTGGTGAACAACAGCATAGAAGG ACTCAGCTATGACAACATCGCCGTCGCGCTATTTCCGACCCAGGCCGCGCCGGTCACTGGCGGCGCTACGATGGAAAGCG TGCTTTCCGTAAATGTGGCCGCCGGCTCGATTGATCGCCTGTATGGATTGTTCGCCATTGGCGGGGTGCTGTTGATCTGC GCTCTAGGCGGCAATCTGCTGTTGTATCGACGTATAAAACAACGCAGCGCTCACACACTGGCCATAGAGCAGGCGTAA Protein sequence : MKNTSTPYRFFRRTRLLLGFLFVFILSGCKETLYSDLTEKEGAEMLSILLEEGLEAEKVPGQKGQTVALSVERAQLSQAI RLLKSRGYPRDDFTSVGELFKKDGLISSPLEERARYIYGLSQEIAATLSQLDGVITARVHVVMPEVENKKAPLKVSSASV FIKYESTVNLDDFVPQIKLLVNNSIEGLSYDNIAVALFPTQAAPVTGGATMESVLSVNVAAGSIDRLYGLFAIGGVLLIC ALGGNLLLYRRIKQRSAHTLAIEQA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
lscJ | AAO18027.1 | LscJ | Virulence | TTSS locus | Protein | 2e-44 | 49 |
hrpB3 | YP_198727.1 | protein HrpB3 | Virulence | Hrp PAI | Protein | 4e-40 | 43 |
hrpB3 | BAB07855.1 | HrpB3 | Virulence | Hrp PAI | Protein | 3e-40 | 43 |
hrpB3 | AAF61284.1 | HrpB3 | Virulence | Hrp PAI | Protein | 3e-40 | 43 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
HCH_03247 | YP_434432.1 | type III secretory pathway, lipoprotein EscJ | VFG0218 | Protein | 2e-43 | 51 |
HCH_03247 | YP_434432.1 | type III secretory pathway, lipoprotein EscJ | VFG0409 | Protein | 1e-43 | 49 |
HCH_03247 | YP_434432.1 | type III secretory pathway, lipoprotein EscJ | VFG0051 | Protein | 1e-38 | 44 |