Gene Information

Name : HCH_03162 (HCH_03162)
Accession : YP_434350.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3253876 - 3255363 bp
Length : 1488 bp
Strand : -
Note : COG1012

DNA sequence :
ATGCCCTTAAAAAAAGAAGACGTATTTCAACTGGCGCGGGACGCTCAACTATACGCCGGCGCGCTGATCCCAGGTCTGGA
CGATGACCATGAGCCTCATTTCGATACCTTGAATCCGTTCACCCAGCAAGTGATCGGACGGGTGCAACAGTGCAACGGCG
GCCATGTGGACGCGGCGGTGAAAGCCGGTCGCGCCGCCTTTGAATCCGGCGTATGGTCGAGACTGTCGCCGGCTGAGCGC
AAACGCATTATGTTGCGCTGGGCGGCGCTGCTACAGGAGCGCCATGAGGAATTGGCGGCGCTGGACTGCCTGGACGCCGG
CAAACCCATCACAGAGTGTCTGAATACCGACATTCCCGACACCATTCACACTATCGCCTGGTACGCCGAAGCCATCGACA
AGCTGTTCGGGAAAATATCCCCCACCGCCAGCGACAATCTTGGGCTGATCGTGAAGGAGCCCATCGGCGTCGTCGGCGCC
GTGCTGCCCTGGAACTTCCCCGCCCTGATGCTGGCCTGGAAAGCGGCGCCCGCCCTCGCCGCCGGCAACTCATTGGTGAT
CAAGCCCGCAGAGCTGACCTCTCTAAGCGCCTACCGCATCGTGCAACTGGCCCACGAAGCGGGCGTACCGAAAGATGTCC
TGACGCTTGTCACCGGCCTCGGTGAAGAAACCGGAAAACCCTTGGGGCTGCACCCCGACGTGGACATGGTGTCTTTCACG
GGGTCAACCGAGGTGGGTCGTCTGTTCCTCACTTATTCAGCGCAAAGCAACCTGAAGGAAATCGTGCTGGAGTGCGGCGG
CAAGAGCCCGCAGATTGTGTTTGAAGACAGCTACGCGCTGGAGGAAATCGCGGACAGTATTCTCTCCGCCGCATTCTGGA
ACATGGGTGAAAACTGCAGTTGCGGCTCTCGTTTGATCGTTCACAAAAGCGTAAAAGACAAGCTGCTCAAGATACTGCAA
AAGCGCTTGGTGGACGGCTGGAAAGTCGGCGATCCACAAGATCCGGAAACCGCTATCGGACCTATGATCGAGCCGGCGCA
CTTCGAGAAGGTCTGCGGTTACATCAAAACCGCGAAAGGGGAAGGAGCCAAATTGATACGGGGCGGCGAAGCCCTGAAAT
TGGGTGCGGGAATGAGTGTCGAGCCAACGATTTTTGATGGCGTCACGGCGGAAATGACGTTGTTCCAGGAGGAAGTGTTC
GGCCCCGTGCTCGCAGTCACCACATTCGAAACCGAAGCCGAGGCGATTCATCTGGCCAACGCCACCAATTACGGTCTGGC
CGCCTCTCTCTACACTTCCGACCTGCGCCGCGCGCAACGGGTCTCCCGCGCAATCAAAGCCGGAACCGTCTCCATCAACT
GCTTCTCCGAAGGCGACATCGCCACGCCTTTTGGGGGCTACAAAACCTCCGGCTTCGGCGGCAGGGACAAAGGCCTGGAA
GCACTGGAGCAGTATGTGCAGACCAAGACACTGTGGTATGGGGGATAA

Protein sequence :
MPLKKEDVFQLARDAQLYAGALIPGLDDDHEPHFDTLNPFTQQVIGRVQQCNGGHVDAAVKAGRAAFESGVWSRLSPAER
KRIMLRWAALLQERHEELAALDCLDAGKPITECLNTDIPDTIHTIAWYAEAIDKLFGKISPTASDNLGLIVKEPIGVVGA
VLPWNFPALMLAWKAAPALAAGNSLVIKPAELTSLSAYRIVQLAHEAGVPKDVLTLVTGLGEETGKPLGLHPDVDMVSFT
GSTEVGRLFLTYSAQSNLKEIVLECGGKSPQIVFEDSYALEEIADSILSAAFWNMGENCSCGSRLIVHKSVKDKLLKILQ
KRLVDGWKVGDPQDPETAIGPMIEPAHFEKVCGYIKTAKGEGAKLIRGGEALKLGAGMSVEPTIFDGVTAEMTLFQEEVF
GPVLAVTTFETEAEAIHLANATNYGLAASLYTSDLRRAQRVSRAIKAGTVSINCFSEGDIATPFGGYKTSGFGGRDKGLE
ALEQYVQTKTLWYGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 6e-84 45
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-62 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-62 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-62 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-62 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_03162 YP_434350.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 7e-63 41