Gene Information

Name : algR (HCH_00292)
Accession : YP_431630.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Virulence
Product : alginate biosynthesis regulatory protein AlgR-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 311362 - 312102 bp
Length : 741 bp
Strand : -
Note : Response regulator of the LytR/AlgR family; COG3279

DNA sequence :
ATGACGAAAGTGATCATCGTCGACGACGAGCCCCTGGCTAGAGAACGCCTGAAACGATTGCTGCTGGACACACACTATGA
GGTCTGCGCGGAAGCCTCCGGCGGGGATGAAGCCCTTGAACGCATCCGCCTCCACTCGCCGGATATCGTCCTGCTTGATA
TCCGCATGCCCGGCAAGGACGGTTTGGAAGTGGCGGCGGAGCTGGCGCAACATCCCCAACCGCCCGCCGTGATCTTCACC
ACCGCCTACGATGAATACGCCATCCAGGCGTTCCGGGTGCGCGCCCAGGACTATCTGCTCAAACCCATCCGTCGCGAAGA
CCTGATGCGCGCCCTGCAAAACGTCACGCAAGTGAATCGCGCCCAGCTGCAAAGCCTGAAGCAAGAGATCAACGGGCAGG
ACGAGGCGCCGGCGGTGGTGGTGTGCCGCAGCAGTCGAGGAATGGAACGCATTAAAATCAGCGACATCCTTTACTTGCAA
GCAGAACACAAGTACGTGACGGTATTTCATGCTCAGGGAGAGACGCTCAGCGATCAACCATTGAAAGAGCTGGAACAGGC
TTTACATCCTCATTTTCTGCGCATCCATCGCAATACGCTGATCAACCGCCACTACATAGAAATACTGCAACGTCGCCACG
ACGGCCATTACGAGGTGCGCCTGCGGGGCGTCAGAGAGGCGCTTCCAGTCAGCCGGCGTCTGGTGACAGAGGTCAAACAA
TTTCTGGCGCAGCCGACCTGA

Protein sequence :
MTKVIIVDDEPLARERLKRLLLDTHYEVCAEASGGDEALERIRLHSPDIVLLDIRMPGKDGLEVAAELAQHPQPPAVIFT
TAYDEYAIQAFRVRAQDYLLKPIRREDLMRALQNVTQVNRAQLQSLKQEINGQDEAPAVVVCRSSRGMERIKISDILYLQ
AEHKYVTVFHAQGETLSDQPLKELEQALHPHFLRIHRNTLINRHYIEILQRRHDGHYEVRLRGVREALPVSRRLVTEVKQ
FLAQPT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 8e-47 46
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 8e-47 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
algR YP_431630.1 alginate biosynthesis regulatory protein AlgR-like protein VFG0119 Protein 8e-49 50