Gene Information

Name : HCH_02462 (HCH_02462)
Accession : YP_433694.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2517124 - 2517831 bp
Length : 708 bp
Strand : -
Note : COG0745

DNA sequence :
TTGACCGCCGCCAAGCCGCGTATACTTGTTATCGACGATGAACCGCAGATTCTGCGCTTTCTGCGTATCAGCCTGCGCTC
GGAAGGCTATGAAGTATTGCAGGCAGGCTCCGCCACTGAAGGATTAATGTTGGCGGCCACCGAAGCGCCGGACGCGATCG
TACTCGATCTGGGACTGCCGGACATGGACGGCCAGGAAGCGTTGAGGCAATTGCGACGCACCTGCCGCACGCCAGTATTG
GTCTTATCTGTGCGCTCTTCAGAGACGGAAAAAGTGGAGGCGCTGGATAACGGGGCCAACGATTACGTCACCAAGCCCTT
CGGCATTCGCGAGTTCGTCGCCCGTATCAGAGTGCTGCTGCGCGATCGTGAACCCGCAGCGTTGCGCCCCTCCGCAGACA
TCTACCATTCCGCCGGCCTGCACATCGACTTTGTGAAGCGCTCGGTGACGCTGGACGGTGAAGACATTCATCTTTCCAAG
AAAGAATACGCCCTGCTGGCCCGGCTGGCGGCCACGCCTGACCATGTGGTGACGCAGCAGCAGTTGCTGGCGGAGATCTG
GGGGCCAACCCACAAGGAGGACACGCACTATCTGCGCATTGTGGTGGCCAAACTGAGAAATAAACTGGGCGACGCCCCCT
CCGCTCCCCGCTTTCTAGTGACGGAACAGGGCGTCGGCTACCGGCTGATTACCTATGAGGCGGAATAA

Protein sequence :
MTAAKPRILVIDDEPQILRFLRISLRSEGYEVLQAGSATEGLMLAATEAPDAIVLDLGLPDMDGQEALRQLRRTCRTPVL
VLSVRSSETEKVEALDNGANDYVTKPFGIREFVARIRVLLRDREPAALRPSADIYHSAGLHIDFVKRSVTLDGEDIHLSK
KEYALLARLAATPDHVVTQQQLLAEIWGPTHKEDTHYLRIVVAKLRNKLGDAPSAPRFLVTEQGVGYRLITYEAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 3e-39 42
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 2e-39 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_02462 YP_433694.1 response regulator VFG1390 Protein 3e-31 42