Gene Information

Name : HCH_01852 (HCH_01852)
Accession : YP_433115.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1881651 - 1883228 bp
Length : 1578 bp
Strand : +
Note : COG1012

DNA sequence :
ATGGCGGCAGCACCGCCGCGCCAGACAGTCATAAAAACAAGCAGAGAGGACAACGGCATGATTTACGAACAACCCGGTCA
CGATAAAGCCTTGGTTAACTTCAAAGCCCGCTACCAGAACTTTATTGGCGGCGAGTGGACGGCGCCCGTACAAGGTCGCT
ACTTTGACAACATCTCTCCGGTGAATGGTAAGAAGTTCTGCGAAATCCCCCGTTCCAGCGCCGAGGACATCGAACTGGCT
CTGGATGCGGCGCACAAAGCCAAAGACGCCTGGGGGCGAACGTCGGCGACGGAGCGCTCCAATCTGCTGCTGAAAATAGC
CGATCGCATCGAACAAAATTTAGAAATCCTGGCGGTGGCGGAAACCTGGGACAACGGCAAGCCGGTGCGGGAGACCCTGG
CGGCGGATATTCCACTTTCTGTAGATCACTTCCGCTACTTCGCCGGCTGTATTCGCGCTCAGGAGGGCGGACTGGCGGAA
ATCGACGCCAATACGTTGTCCTATCACATCCATGAGCCGCTGGGCGTTGTGGGGCAGATCATTCCCTGGAACTTCCCAAT
TCTGATGGCGGCCTGGAAACTGGCGCCGGCGCTGGCGGCGGGCAACTGCGTGGTGCTTAAGCCTGCGGAGCAGACGCCGG
CCTCAATTTTGGTGCTGATGGAGTTGATTGGCGACCTGCTGCCGGCGGGTGTGGTGAATATCGTTAATGGCTGGGGAGCG
GAAGCGGGTCAGGCGCTGGCCACCAGCAAACGCATCGCCAAGATCGCATTTACCGGCTCAACCCCGGTTGGTTCGCATAT
TCTGAAATGCGCGGCGGAAAATATTATTCCTTCCACTGTGGAGCTGGGTGGCAAGTCCCCCAACATCTATTTTGCGGACA
TCATGCGTCAGGAGGAGTCCTTCATCAGCAAATGCGTGGAAGGCATGGTGCTGGCGTTTTTCAACCAGGGAGAAGTGTGC
ACCTGCCCGTCCCGGGCGCTGATTCATGAGTCTATCTATGATGACTTTATCGGCAGAGTCATTGATCGCACCAAAACGAT
CAAGCGCGGCAATCCTCTGGATACCGACACCCAGGTGGGCGCGCAGGCTTCTCAGGAACAGTTCGATAAGATTCTGAGTT
ACATCGAAATCGGCCGCAAAGAAGGCGCGCAGGTATTGTTGGGCGGCGGCGTTGAAAAGCTGAGCGGCGATCTGCAGGAC
GGTTTATATATTCAGCCGACCCTGTTGAAAGGCGGTAATGACATGAGAGTGTTTCAGGAGGAGATCTTTGGTCCGGTAGT
GGGCGTCACTACTTTCAAAACCGAGGACGAAGCTCTGAGCATCGCCAACGATACCGAGTATGGGCTGGGCGCCGGCGTAT
GGACGCGGGATATCAATCTGGCGTTCAGAATGGGACGACAAATCAAGGCGGGCAGGGTGTGGACCAATTGTTATCATCAC
TATCCGGCGCATGCGGCCTTTGGCGGCTACAAGAAATCCGGCGTCGGCCGGGAAACGCACAAGGTGGCGTTGGAGCACTA
CCAGCAAACCAAGAATCTGCTGGTGAGTTATGACATCAACCCGTTAGGCTTTTTCTAA

Protein sequence :
MAAAPPRQTVIKTSREDNGMIYEQPGHDKALVNFKARYQNFIGGEWTAPVQGRYFDNISPVNGKKFCEIPRSSAEDIELA
LDAAHKAKDAWGRTSATERSNLLLKIADRIEQNLEILAVAETWDNGKPVRETLAADIPLSVDHFRYFAGCIRAQEGGLAE
IDANTLSYHIHEPLGVVGQIIPWNFPILMAAWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDLLPAGVVNIVNGWGA
EAGQALATSKRIAKIAFTGSTPVGSHILKCAAENIIPSTVELGGKSPNIYFADIMRQEESFISKCVEGMVLAFFNQGEVC
TCPSRALIHESIYDDFIGRVIDRTKTIKRGNPLDTDTQVGAQASQEQFDKILSYIEIGRKEGAQVLLGGGVEKLSGDLQD
GLYIQPTLLKGGNDMRVFQEEIFGPVVGVTTFKTEDEALSIANDTEYGLGAGVWTRDINLAFRMGRQIKAGRVWTNCYHH
YPAHAAFGGYKKSGVGRETHKVALEHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-159 70
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-168 68
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-168 68
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-168 68
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-167 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_01852 YP_433115.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 2e-159 70