Gene Information

Name : HCH_01849 (HCH_01849)
Accession : YP_433112.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1877581 - 1878252 bp
Length : 672 bp
Strand : -
Note : COG0745

DNA sequence : 
ATGCGTTTATTAGTCATTGAGGACGCCGAGATTTTACGCCAGAGCTTGGTCATCGGACTGGGCGACGCCGGTTATGTGGT
TGACGCCGCCGCAGACGGCGAGGAAGGTTTATGGCTCGCCAGTGAGCAAGGCTACGACCTGATTATTCTCGACATCATGC
TTCCACACATGAACGGATTCGAATTACTGGACCGACTGCGCACCCTCGGCGCGGATAGTCTGGTGTTGATGCTGACCGCC
CGGGACGAGGTTGAAGATCGCGTATTAGGCCTGCGCAGCGGCGCCGACGACTACCTGGTGAAACCTTTTGATTTCGATGA
ATTGTTGGCGCGAATTGAGGCTCTGCTGCGTCGCCGCGCCGGTTGCGCAAGCAATCTGTTGGAAATCGGTGAATTGACCA
TCAACTTACACAGCAAACAAGTCAGCGTCAGTGGCGTCCCAGTCTCCCTCCCGCCCCGCGAGTACGCTCTGTTGGAGTGC
CTGGCGTTGAACCGTCACCGCGTGGTGTCACGACAGGAAATCGAGCACAAAATCTATGACGACAAAATCGAACCAATGAG
CAATGTCGTGGATTCCGCCATTTCCAGTCTGCGAAAAATGATTGATCACAAGGATCGTCCTTCGTTTATTCTTACCCGCC
GGGGACATGGCTATCAGATACGCCAGTCATAA

Protein sequence : 
MRLLVIEDAEILRQSLVIGLGDAGYVVDAAADGEEGLWLASEQGYDLIILDIMLPHMNGFELLDRLRTLGADSLVLMLTA
RDEVEDRVLGLRSGADDYLVKPFDFDELLARIEALLRRRAGCASNLLEIGELTINLHSKQVSVSGVPVSLPPREYALLEC
LALNRHRVVSRQEIEHKIYDDKIEPMSNVVDSAISSLRKMIDHKDRPSFILTRRGHGYQIRQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-17 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-17 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_01849 YP_433112.1 response regulator BAC0197 Protein 4e-22 45
HCH_01849 YP_433112.1 response regulator BAC0083 Protein 1e-19 44
HCH_01849 YP_433112.1 response regulator BAC0125 Protein 6e-20 43
HCH_01849 YP_433112.1 response regulator NC_002516.2.879194.p Protein 5e-22 43
HCH_01849 YP_433112.1 response regulator BAC0308 Protein 2e-20 43
HCH_01849 YP_433112.1 response regulator BAC0487 Protein 2e-18 43
HCH_01849 YP_433112.1 response regulator AE015929.1.gene1106. Protein 2e-11 42
HCH_01849 YP_433112.1 response regulator BAC0111 Protein 2e-19 42
HCH_01849 YP_433112.1 response regulator NC_010079.5776364.p0 Protein 1e-14 41
HCH_01849 YP_433112.1 response regulator NC_002952.2859858.p0 Protein 1e-14 41
HCH_01849 YP_433112.1 response regulator NC_007622.3794948.p0 Protein 1e-14 41
HCH_01849 YP_433112.1 response regulator NC_003923.1003417.p0 Protein 1e-14 41
HCH_01849 YP_433112.1 response regulator NC_013450.8614146.p0 Protein 1e-14 41
HCH_01849 YP_433112.1 response regulator NC_002951.3238224.p0 Protein 1e-14 41
HCH_01849 YP_433112.1 response regulator NC_007793.3914065.p0 Protein 1e-14 41
HCH_01849 YP_433112.1 response regulator NC_002758.1121390.p0 Protein 1e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_01849 YP_433112.1 response regulator VFG0596 Protein 4e-18 44