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Name : lysS (HCH_01783) Accession : YP_433052.1 Strain : Hahella chejuensis KCTC 2396 Genome accession: NC_007645 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1808616 - 1810139 bp Length : 1524 bp Strand : + Note : TIGRFAMsMatches:TIGR00499 DNA sequence : ATGACAGAGAACCAAAATCCTGCAATAGATGAAAACAAACTGATCGCTGAGCGCCGGGGCAAGCTGGGTAAGTTGCGGGA AAAGGGGCTGGCGTTTCCAAATGATTTTCGTCGCGACAGCTACTGTGCAGACCTGCAGGCTCGTTATGGTGATAAAAGCA AGGAAGAGCTGGAGGAAGCTAGCGTGCGCGCCAAGGTGTCTGGCCGCATCATGGCGATGCGTGGACCTTTTGTCGTCATA CAGGACATGACGGGCCGCATTCAGCTGTACATAGATCGTAAAGGCTTGCCGCCGGAACAGCTGGAAAACGTCAAACTGTG GGATTTGGGCGATATCGTCGCAGCGGAAGGCGCTCTGCACAAATCAGATAAGGGCGATCTGTACGTCAATATGGAAAACC CGCGTTTGATGGTGAAAGCGCTACGTCCTTTGCCGGACAAACATAAAGGTCTGACCAACACGGAGATGCGCTATCGCCAA CGCTATCTGGACCTGATCACCAATGAAGAAGCGCGGGAAACCTTCCGTATTCGCTCCAAAGTGATTGAAAGCATACGTTA CTTCCTGACCAAGCGTGACTTTATTGAGGCGGAGACGCCGATGCTGCAGGTGATTCCTGGCGGCGCCACGGCGCGTCCTT TTGTGACTTATCACAATGCCCTGGATATTGAGATGTTCCTGCGTATAGCGCCGGAGCTTTATCTCAAGCGTTTGGTAGTG GGCGGTTTTGAGCGGGTGTTTGAAATTAACCGCAACTTCCGCAATGAAGGCTTGTCCACCCGTCATAATCCTGAATTCAC CATGATTGAATTCTACCAGGCGTTTGCCGATTACAAAGACCTGATGAATCTGACCGAGGAAATGCTGCGCTGGGTGGCTC AGGAAGCGCTAGGGACAACGGAAGTGCGCAACACATCCAAGAATACGGATGGCGATGTAGTCGATGAAATCATCTATGAC TTCGGTAAACCTTTCATACGCATGACGGTCGTAGAGTCGATTTTACACTTCAACCCCGAGCTCACGCTGGGAGATATTGA CAATATGGACGGCGCTAAAAAGGTGGCGACTGGTCTGGGTATTCCTCTCAAAGCATCCTGGGGCTTGGGCAAGATTCAAA TCGAAATCTTTGAAAAGACAGTTGAACATCGCTTGATGCAGCCGACCTTTATTACTGAGTACCCGACGGAAGTGTCGCCG TTGGCGCGTCGCAATGACGATAATCCTTTCGTTACTGACCGGTTTGAGTTTTTCGTGGGCGGCAGAGAGATCGCCAACGG ATTCTCGGAGTTGAACGACCCGGAAGATCAGGCTGAGCGCTTCCGTAAGCAAGTGGCGGAGAAAGAGGCGGGTGATGATG AGGCGATGTTCTTCGATGAGGATTACATAACTGCATTAGAGCACGGCATGCCGCCGACCGCGGGTGAGGGAATTGGCATC GACCGATTAGTGATGCTGCTGACCGATTCGCCCTCAATCCGAGACGTTATATTGTTTCCTCACATGCGTCCGTTAGCGGA CTGA Protein sequence : MTENQNPAIDENKLIAERRGKLGKLREKGLAFPNDFRRDSYCADLQARYGDKSKEELEEASVRAKVSGRIMAMRGPFVVI QDMTGRIQLYIDRKGLPPEQLENVKLWDLGDIVAAEGALHKSDKGDLYVNMENPRLMVKALRPLPDKHKGLTNTEMRYRQ RYLDLITNEEARETFRIRSKVIESIRYFLTKRDFIEAETPMLQVIPGGATARPFVTYHNALDIEMFLRIAPELYLKRLVV GGFERVFEINRNFRNEGLSTRHNPEFTMIEFYQAFADYKDLMNLTEEMLRWVAQEALGTTEVRNTSKNTDGDVVDEIIYD FGKPFIRMTVVESILHFNPELTLGDIDNMDGAKKVATGLGIPLKASWGLGKIQIEIFEKTVEHRLMQPTFITEYPTEVSP LARRNDDNPFVTDRFEFFVGGREIANGFSELNDPEDQAERFRKQVAEKEAGDDEAMFFDEDYITALEHGMPPTAGEGIGI DRLVMLLTDSPSIRDVILFPHMRPLAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-134 | 57 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-81 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_433052.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 7e-135 | 57 |
