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Name : dnaB (HCH_01714) Accession : YP_432987.1 Strain : Hahella chejuensis KCTC 2396 Genome accession: NC_007645 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 1739679 - 1741106 bp Length : 1428 bp Strand : + Note : unwinds double stranded DNA DNA sequence : ATGAATGAGTCAGTAATACGTAAAGATTCGACCAAGTCGGAAGGGCAGGGCCCTGGCGGCGCTGCGCTGGTCAGCTCCTC GGCGGTCAAAGCGCCGCCCCATTCAATTGAGGCGGAACAGTCTGTTCTGGGTGGTCTGATGCTGGATAACGCCAGTTGGG ACAAGATTTCAGATATCATTACAGCGAAAGACTTTTATCGTCTGGACCATCGCCTGATATTTGGCTCAATTTCACGATTG GCGAATCTCGGCAGTCCTTTGGACGCCATCACCGTCTCAGAAGAGCTGGATAATCGCAACGAGTTAAACTCTGCTGGTGG ATTGGCCTACCTGAGTGAGCTGGCCAAGAATACTCCTAGCGCCGCCAATATTCGCGCCTATGCGGAAATTATTCGCGAAC GTTCTGTGTTGCGCCAGTTAATCACCGTCGCTAATGAAATCGCCGACGAGGCGTATCAGACGGAAGGGCGCACCAGTACA GAGGTGTTGGACGATGCGGAGCGACGGGTCTTTCAGATAGCGGAGTCGCGGCCAAATCAGGGCGGACCGGAATCGGTGAA TCCGATTCTAACGAAGACCCTGAAAAAAATTGATGAGCTGTTTCACTCGGATGGCGCTATCACGGGTGTTACTACAGGGT TTCGCGACCTGGATGATCGCACCTCGGGGATGCAGGCTTCAGACCTGATTATCGTTGCCGGTCGTCCCTCAATGGGTAAG ACCACATTCGCTATGAACCTGGTGGAGAACGCACTGATACTGGGAGGGAAGCCTGTCTTGGTTTTCAGTATGGAGATGCC TTCCGACTCCATCGTAATGCGTATGCTGTCTTCCTTGGGGCGCATTGATCAGACTAAAGTGAGAAGCGGAAAACTGGATG AGGATGATTGGCCCCGTCTCACATCAGCCGTCAATATGTTGAAAGACAAGCCTTTATATATCGATGATACGGCAGCGTTA AGTCCAACTGAAATGCGCTCCAGGGCTAGAAGAGTGGCGCGAGATCACAATGGTGAAATTGGCTTGATCATGGTGGATTA CCTTCAGCTGATGAGGGTGCCGGGGATGACGGAAGGTCGTACGGCTGAGATTTCTGAAATTTCACGAGGCTTGAAAGCCC TGGCGAAGGAGCTGAACTGTCCTGTAGTCGCGCTCTCCCAGCTTAACCGCAGCTTGGAACAAAGGCCCAATAAGCGCCCG GTCAACTCCGACTTGCGGGAGTCTGGGGCGATTGAGCAGGATGCTGACTTGATTATGTTTATCTATCGGGATGAGGTTTA TCACGAGGATAGTCCAGACAAAGGTATTGCAGAAATTATTATCGGTAAGCAGCGTAACGGCCCTATTGGGACGGTGCGCT TGGCGTTCATGGGTAGGTTCACCCGCTTTGAAGATTTGGCCCACGATTATGGCGGGGATTACGAGTAA Protein sequence : MNESVIRKDSTKSEGQGPGGAALVSSSAVKAPPHSIEAEQSVLGGLMLDNASWDKISDIITAKDFYRLDHRLIFGSISRL ANLGSPLDAITVSEELDNRNELNSAGGLAYLSELAKNTPSAANIRAYAEIIRERSVLRQLITVANEIADEAYQTEGRTST EVLDDAERRVFQIAESRPNQGGPESVNPILTKTLKKIDELFHSDGAITGVTTGFRDLDDRTSGMQASDLIIVAGRPSMGK TTFAMNLVENALILGGKPVLVFSMEMPSDSIVMRMLSSLGRIDQTKVRSGKLDEDDWPRLTSAVNMLKDKPLYIDDTAAL SPTEMRSRARRVARDHNGEIGLIMVDYLQLMRVPGMTEGRTAEISEISRGLKALAKELNCPVVALSQLNRSLEQRPNKRP VNSDLRESGAIEQDADLIMFIYRDEVYHEDSPDKGIAEIIIGKQRNGPIGTVRLAFMGRFTRFEDLAHDYGGDYE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-115 | 55 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 8e-99 | 53 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 4e-103 | 53 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 9e-103 | 53 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 9e-102 | 51 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-102 | 50 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-95 | 48 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-95 | 48 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 4e-80 | 44 |
