Gene Information

Name : tpx (HCH_01604)
Accession : YP_432886.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Virulence
Product : peroxiredoxin
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 1614990 - 1615487 bp
Length : 498 bp
Strand : +
Note : COG2077

DNA sequence : 
ATGGCTTCTATCACCTTAAAAGGCAATCCGGTTGAAACCAAAGGCGACCTGCCTGCAGTGGGCTCCAGCGCGCCGGATTT
TACTCTGGTCAAACCTGACCTGTCCGAGGCGACGCTGAAGGATTACGCCGGCAAGCGTCTGGTGCTGAATATTTTCCCCA
GTGTGGACACGCCTACTTGCGCGACTTCCGTACGCATGTTCAATGAGAAAGCGAGTAAGAAGGACAATACTGCCGTATTG
TGCGTCTCTGCTGATCTGCCATTCGCCATGGCGCGCTTCTGCGGCGCGGAAGGATTGCAAAATGTGGATAACGGCTCTGT
ATTTCGTAATGCCGAGTTCGGTGATCGTTATGGTGTGACGGTAATGACCGGTCCACTGAAAGGACTGTTGTCACGGGCGG
TTGTGGTGATCGATGAGTCCGGCAAAGTGCTGCACACGGAGCAAGTGGCGGAAATCGCGGATGAGCCTAATTATGAGGCT
GCGCTGGCTGCGCTCTAA

Protein sequence : 
MASITLKGNPVETKGDLPAVGSSAPDFTLVKPDLSEATLKDYAGKRLVLNIFPSVDTPTCATSVRMFNEKASKKDNTAVL
CVSADLPFAMARFCGAEGLQNVDNGSVFRNAEFGDRYGVTVMTGPLKGLLSRAVVVIDESGKVLHTEQVAEIADEPNYEA
ALAAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 3e-38 46
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-38 46
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-38 46
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 9e-39 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_432886.1 peroxiredoxin VFG0087 Protein 4e-39 46