Gene Information

Name : HCH_01436 (HCH_01436)
Accession : YP_432722.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1438252 - 1438932 bp
Length : 681 bp
Strand : -
Note : COG0745

DNA sequence : 
ATGAACTTGTTGCTGATTGATGACGATAATGACCTGGCGCGCCTGTTAAACCGCTACTTTCAGCGATTCGGCTGGGAACT
GCGCCATGCTTCCGCGCCGTCAATCGCCTATGCGCAGTTAAAGCAAAGCCAGCCCGACGCCATTATTCTGGACGTCATGT
TGCCGGAGGAAGACGGATTTTCCGTGTGCCGCAAGCTTCGCCATGACTACACGACGCCAATCATTATGTTGACTGCCCGC
GGCGAAGTGACGGATCGCATCGTTGGATTGGAGATAGGCGCCGACGACTATCTGCCGAAACCTTTTGAACCAAGGGAGCT
CGCTGCGCGCATTCAAAGCATCACCCGTCGCCACGCCTCTACGGAAAAACCGGTTCCCCTCATGTATTTCCGCGATTTGG
AAATTAACCTGACGACGCAAGAAGTGCTGGTGGCCGGGCGTCCGCTTACACTGACCACATCCGAGTTCCGCCTGCTTCAG
CTATTCGCCTCCGCACCCGGTAAAGTGTTTTCCCGCGACGAAATCATGAACAGCCTCAAAGGTACTGAAGTAGAGCTGTT
CTCCCGCGCGATCGACATTACGGTCAGCCGTCTGCGTCAAAAAATGAAGACCAAAAGTAAAAGGGAGTTCATAAAGACCG
TCTGGGGAGCCGGCTACCGATTTGTCGGAGAAGCGCTGTAA

Protein sequence : 
MNLLLIDDDNDLARLLNRYFQRFGWELRHASAPSIAYAQLKQSQPDAIILDVMLPEEDGFSVCRKLRHDYTTPIIMLTAR
GEVTDRIVGLEIGADDYLPKPFEPRELAARIQSITRRHASTEKPVPLMYFRDLEINLTTQEVLVAGRPLTLTTSEFRLLQ
LFASAPGKVFSRDEIMNSLKGTEVELFSRAIDITVSRLRQKMKTKSKREFIKTVWGAGYRFVGEAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 6e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_01436 YP_432722.1 response regulator CP000675.2.gene1535. Protein 2e-33 45
HCH_01436 YP_432722.1 response regulator DQ212986.1.gene4.p01 Protein 5e-28 43
HCH_01436 YP_432722.1 response regulator CP000647.1.gene4257. Protein 2e-27 43
HCH_01436 YP_432722.1 response regulator BAC0533 Protein 2e-27 43
HCH_01436 YP_432722.1 response regulator CP000034.1.gene3671. Protein 8e-36 42
HCH_01436 YP_432722.1 response regulator CP001918.1.gene5135. Protein 2e-27 42
HCH_01436 YP_432722.1 response regulator NC_008702.1.4607594. Protein 3e-33 42
HCH_01436 YP_432722.1 response regulator CP000034.1.gene3834. Protein 5e-27 42
HCH_01436 YP_432722.1 response regulator NC_002695.1.915041.p Protein 5e-27 42
HCH_01436 YP_432722.1 response regulator CP001138.1.gene4273. Protein 2e-27 42
HCH_01436 YP_432722.1 response regulator HE999704.1.gene2815. Protein 2e-29 41
HCH_01436 YP_432722.1 response regulator NC_012469.1.7685629. Protein 3e-25 41
HCH_01436 YP_432722.1 response regulator CP004022.1.gene3215. Protein 7e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_01436 YP_432722.1 response regulator VFG1702 Protein 2e-30 41