Gene Information

Name : HCH_01396 (HCH_01396)
Accession : YP_432684.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Virulence
Product : cobalamin/Fe3+-siderophores ABC transporter ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1404411 - 1405184 bp
Length : 774 bp
Strand : -
Note : COG1120

DNA sequence :
ATGCCTATGCTTGAAGTGGAAGATATCCGCGTGCGCCGGGAAGGGAGAGAAATTCTGTCGCTGCCCCGTCTGACCCTGGA
CCCACGCCGTTTCACCGTGATTCTTGGCCACAACGGCTCAGGGAAATCGACGCTGATCAATCTGCTGGCGCGACAAATCC
AGGCGGACGCCGGCGCCATCACGCTGCAAAATCGGCCTTTGAACGACTACTCCCAACGGGATCTGGCCAGAAACATCGCC
TTTCTGCCGCAAAACCTGCCCGAGGTCGCCGGCCTCAATGTGCGCGAACTGATACGCCTGGGCCGCTTCCCCTGGCGCGG
AACCTTCGGACGCTGGCGCCAAGAAGATGGAGACATCATCGACGCGGCGATGGCGCAGACCGATGTGACCCGCTACGCAG
ACCACCTGACGGACCAATTATCCGGCGGCGAACGTCAACGCGCCTGGATCGCCATGCTGCTGGCTCAACAGGCCCCGCTG
CTGATGCTGGACGAGCCGACTTCCGCGCTGGATCTGTCCCATCAGTACGAAGTGATGGCGCTGTTACGCCGTCTGAATCT
GGAACATGGACGCGGCGTGATCGTCATTCTGCATGACGTCAATCTTGCCGCCCGTTTCGCCGATCGCATCGTCGCACTGA
AACAAGGCCGTCTGGCGTTCGACGGTGCGCCGCAAGAGCTGCTGTCCCCCACCCTGTTAGCTGAGCTGTATGGCATTGAC
ATAGCGTTGGTCGATCACCCTCGGCAGAGCGGCAAAATCGCGGTGGTCGCATGA

Protein sequence :
MPMLEVEDIRVRREGREILSLPRLTLDPRRFTVILGHNGSGKSTLINLLARQIQADAGAITLQNRPLNDYSQRDLARNIA
FLPQNLPEVAGLNVRELIRLGRFPWRGTFGRWRQEDGDIIDAAMAQTDVTRYADHLTDQLSGGERQRAWIAMLLAQQAPL
LMLDEPTSALDLSHQYEVMALLRRLNLEHGRGVIVILHDVNLAARFADRIVALKQGRLAFDGAPQELLSPTLLAELYGID
IALVDHPRQSGKIAVVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-38 41
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-35 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-35 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-35 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_01396 YP_432684.1 cobalamin/Fe3+-siderophores ABC transporter ATPase VFG0925 Protein 1e-38 42