Gene Information

Name : HCH_01263 (HCH_01263)
Accession : YP_432557.1
Strain : Hahella chejuensis KCTC 2396
Genome accession: NC_007645
Putative virulence/resistance : Virulence
Product : peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1275559 - 1276305 bp
Length : 747 bp
Strand : -
Note : COG1136

DNA sequence : 
ATGAGCGCCGCGAAGCATCCGTCAACGCCCCCATTGCAATCAAAGCCGGCGGCGCCTGTCGTCGCCTTGCATGAGGTCAA
TCGCCATTTCCAACTCGGCGAACAAACCGTCAAGGCCCTGGATGCGGTAAGCCTGCAGCTGCTGGCTGGCGAATACGTCT
CCGTCATGGGTCCTTCCGGCTCCGGCAAGTCAACCCTGCTGAATATTCTTGGGCTTCTGGATCGTCCTGACGCCGGCGCC
TATTTGTTGAATGGAGACCCCACCCAGGATCTCAGCGAGGAAAAGCGGGCGCGCTTGCGTCAGCAGAATATCGGATTCGT
GTTTCAGTCCTATCACCTTATCCCCCGCATGAGCGCACGGGAGAACATTGAGTTGCCGCTGGTTCTCGCCGGCGCGGCGC
CCAAAGAACGCGCGCGCATGGTGTCCGACATGCTGGAGCGACTGGGACTGACCGACCGCGCCAGTCACCTGCCCAATCAG
TTGTCTGGCGGACAACGACAACGAGTGGCCATCGGCAGGGCGATCATCATGAAGCCCAAGCTGCTCCTCGCGGATGAGCC
GACCGGGAATCTGGACACCCAATCCGGCGCCGATGTCGTTACCTTGCTGGAAGAGTTGAACGCTCAGGGTATTACCCTGG
TCGTGGTCACTCATGATGTTGAACTGGGCAAACGCGCCAGGCGTCAGCTGCGTATGGTGGACGGCCGCATTCAGAGTGAC
GTACGCCAAAGAAACGTGAGCGACTAG

Protein sequence : 
MSAAKHPSTPPLQSKPAAPVVALHEVNRHFQLGEQTVKALDAVSLQLLAGEYVSVMGPSGSGKSTLLNILGLLDRPDAGA
YLLNGDPTQDLSEEKRARLRQQNIGFVFQSYHLIPRMSARENIELPLVLAGAAPKERARMVSDMLERLGLTDRASHLPNQ
LSGGQRQRVAIGRAIIMKPKLLLADEPTGNLDTQSGADVVTLLEELNAQGITLVVVTHDVELGKRARRQLRMVDGRIQSD
VRQRNVSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-36 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_01263 YP_432557.1 peptide ABC transporter ATPase NC_008702.1.4606598. Protein 3e-57 61
HCH_01263 YP_432557.1 peptide ABC transporter ATPase NC_012469.1.7686878. Protein 2e-53 45
HCH_01263 YP_432557.1 peptide ABC transporter ATPase CP001581.1.gene598.p Protein 2e-36 42
HCH_01263 YP_432557.1 peptide ABC transporter ATPase CP001581.1.gene798.p Protein 1e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HCH_01263 YP_432557.1 peptide ABC transporter ATPase VFG2059 Protein 7e-21 42